Cydia strobilella (spruce-seed moth): 134746558
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Entry
134746558 CDS
T10503
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134746558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cstb03041
]
134746558
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134746558
Spliceosome [BR:
cstb03041
]
Complex A
U2 snRNP components
U2 related factors
134746558
Complex B
134746558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
134746558
NCBI-ProteinID:
XP_063537040
LinkDB
All DBs
Position
13:complement(5641483..5665882)
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AA seq
1016 aa
AA seq
DB search
MVRSGRDRERDRERRRSHSRSASPDRKRRRSRSRSRDRASKSSKRKRSRSRERESKRDRS
RDRDRDRKSDKRDDKRNGASSKSSRKKSPEKDRDRSKSKEKSIKQESTEYDPGSVDKEEE
QVRLEAEMQKRRERIERWRAERKRKELESAKKEVQKGSLISNIQIPAKKWSLEDDSGDEG
EIARNAEDAESKEKASAEDKMEVEDEIDSLDAYMQEVQQEVRKVNQMDQQRGMTVPANGG
TGVVILTGTAKKKVTEQKNKGELIEQNQDGLEYSSEEENEDIKDTAANLASKQRKELAKV
DHTALQYMPFRKAFYTEVSELARMTPEEVEAYRTELEGIRVKGKGCPKPIRTWAHCGVSK
KEMDILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPLE
DTDGPISLIMTPTRELCMQIGKDIRKFAKSLGLTVVCVYGGTGISEQIAELKRGAEIIVC
TPGRMIDMLAANSGRVTNLRRVSYIVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSA
TFPRQMEALARRILQKPIEIQVGGRSVVCKEVEQHVAVLEDDAKFFKLLELLGLYSQMGS
IIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVAAR
GLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWTFLTPEQGRYAGDILRAVEGS
GAPVPPALRQLWETYKEAQEKDGKKVHTGGGFSGKGFKFDESEAMAASEKKKYQKAALGL
QDSDDEDVEGDLDQQIETMLAAKKIVKEIKPGVAAPGVPGGAGAGGAAPAGGADGKLELA
RRLASRINLAKGLGAEHKGATQQAAEAILKGAPSAHTLITAKTVAEQLAAKLNTRLNYQP
RDESNNEPAEEVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVPTG
KNPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggttagaagcgggcgtgatcgagaacgcgatcgtgaacgtcgtcgctcccacagtcgg
tcagcttcgcccgaccgcaaaaggcggcgctccaggtccaggagcagggaccgagcttcg
aaatcttcgaaaaggaagcgtagccgtagcagggaaagggaatctaaacgagatcgcagc
agggatagagatagggacaggaaaagtgataagagggatgacaaacgcaatggtgcaagc
agtaagtcatcaaggaaaaagtcacctgaaaaggatagagatcgatcaaaatccaaagag
aaatctattaaacaagagtccacggaatatgaccctggctctgtggacaaggaagaggaa
caagtgcgcttagaggcggaaatgcaaaagcgccgcgagcgcatcgagcgctggagagcg
gaacgaaagcgaaaagagctggagtctgccaagaaggaggtccagaagggcagcctaatc
agcaacattcagatacctgccaagaagtggtctctggaggatgactctggagatgaaggt
gaaattgctcgcaatgctgaggatgcagagagcaaagaaaaagcctcagcagaagacaaa
atggaggtagaggatgagattgattccctggatgcttacatgcaagaggttcaacaggag
gtgcgcaaagtgaaccaaatggaccagcagaggggaatgactgtgccagctaacggaggc
acgggcgtggtcattctgacgggcacggccaagaaaaaggtcacagaacaaaagaataaa
ggtgaactaatagagcagaaccaggacggcctagaatattcatctgaagaggaaaacgag
gacattaaggacacggcggcgaacctcgcgtccaagcaaagaaaggaattggctaaagtg
gaccataccgcgctgcaatacatgccgtttaggaaggccttctatactgaggttagcgag
ttagcccggatgacgcctgaagaagtggaagcgtaccgcacagaactagaaggcatccga
gtgaagggcaaaggttgcccaaaacccatcagaacatgggcgcactgcggcgtgagcaag
aaagagatggacatactgaagaagctcaactttgagaaacctacccctattcaggcacag
gctattccggctatcatgtcgggaagggacctaataggcatagccaagaccggttccggc
aagaccctcgccttcattctacccatgttccgccacgtactagaccagccgcccttagaa
gacaccgacggacccatatccctcatcatgacccccactagggagttatgtatgcagatc
ggaaaggatataaggaagttcgctaaatcgctgggtctgacggtcgtgtgtgtttatgga
ggcactgggatatctgagcagatcgcggaattaaagcgcggcgcagagatcattgtatgc
actcccggccgaatgatagacatgttagcggccaactctggtcgcgtcaccaatttacga
cgagtttcctacatcgtgctggacgaagctgaccgcatgtttgacatgggcttcgagccg
caggtgatgaagatcatagacaacatccggccggaccggcagacggtgatgttcagcgcc
acgttcccgcgccagatggaggcgctcgccaggcgcattctgcagaaacctattgaaatt
caggtcggcggccgcagcgtagtctgcaaagaggtcgaacagcacgtagccgttctagaa
gacgacgccaagttcttcaaactgctcgaactgctcgggttgtacagccagatgggcagc
atcatcgttttcgttgacaaacaggaaaatgctgacagtctgctcaaagatctgatgaag
gcgtcatactcctgcatgagtttacatggagggattgatcaattcgacagggactccacc
atcgtggacttcaagaacgggaaggtgaagctacttgtggcaaccagtgtcgccgcgcga
gggctggatgtcaaacaactggtgctggtggtcaactacgactgtcctaaccattatgaa
gactacgtgcacagatgtggtcgcaccggccgcgcaggcaacaaaggttacgcctggaca
ttcctcacgccagagcaaggaagatacgcgggcgacatattacgagcggtagaaggtagc
ggggcgcccgtaccgccggctctcaggcagctgtgggagacgtacaaagaagcgcaggaa
aaggatggcaagaaggtgcatactggagggggattcagtgggaaaggtttcaaatttgac
gaatcggaagcaatggcagcgagtgaaaagaagaagtaccagaaagcagcgctcgggcta
caggactctgatgacgaggacgtggagggagacctcgaccagcagatcgagaccatgctg
gctgctaagaagattgtcaaggagatcaagccgggcgtagcggcccccggcgtgccgggc
ggggcgggcgcggggggcgcggcgccggcggggggcgcggacggcaagctggagctggcg
cgcaggctggcgtcgcgcatcaacctggccaaggggctcggcgccgagcacaagggcgcc
acgcagcaggccgccgaggccatcctcaagggcgcgccctctgcgcacacgcttattacg
gctaagacagttgcggaacagttagcggccaaactgaacacccgattgaactaccagcct
cgtgatgagagcaacaacgaaccggctgaggaggtgttccggaaatatgaaactgagttg
gagatcaatgatttcccgcaacaggcgcgctggcgggtcactagcaaggaagccctggcc
ctcatcagtgagtactccgaagccggcatcacagtccgcggcacctacgtcccaaccggc
aagaacccgcccgaaggcgagcgcaagctgtatctcgccatcgagagctcgcaagagctc
gcggtcgccaaagccaagtcggagatcactcgcctgatcaaggaagaactgctcaagctg
cagacctctgcgcatcacatggtcaataaggctagatataaagttttgtaa
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integrated database retrieval system
