KEGG   Cydia strobilella (spruce-seed moth): 134746699
Entry
134746699         CDS       T10503                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cstb  Cydia strobilella (spruce-seed moth)
Pathway
cstb03018  RNA degradation
cstb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cstb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134746699
  09123 Folding, sorting and degradation
   03018 RNA degradation
    134746699
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cstb03019]
    134746699
   03041 Spliceosome [BR:cstb03041]
    134746699
Messenger RNA biogenesis [BR:cstb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     134746699
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     134746699
Spliceosome [BR:cstb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    134746699
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 134746699
NCBI-ProteinID: XP_063537292
LinkDB
Position
13:complement(6517940..6519704)
AA seq 119 aa
MASKEGSGDKAKGPQGAGDGKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPL
LNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFITQEG
NT seq 360 nt   +upstreamnt  +downstreamnt
atggcttcaaaagaaggaagcggtgataaggcaaagggtcctcaaggagcaggagatgga
aaagaaaagcgaaggaaagagtctattctcgacttgagcaaatacttggagaagagtata
cgagtaaagttcgccggagggcgcgaggccgccggcattttgaagggttatgatcctctg
ctaaacttggtgctcgacaacaccaccgaatttcttagagatcctgatgacccatacaaa
ctgctagatgacaccagagccttaggactagttgtgtgccgaggaacctcagtggtgttg
atctgtcccatggatggaatggaggcaattccaaaccccttcataacccaagaaggatag

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