KEGG   Cydia strobilella (spruce-seed moth): 134746821
Entry
134746821         CDS       T10503                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
cstb  Cydia strobilella (spruce-seed moth)
Pathway
cstb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cstb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134746821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cstb03041]
    134746821
Spliceosome [BR:cstb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    134746821
 Complex C
   U5 SnRNP specific factors
    134746821
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_RIG_2nd NBCH_WD40 ANAPC4_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT140_1st eIF2A Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Cytochrom_D1 KNTC1_N WD_LRWD1 WDR54
Other DBs
NCBI-GeneID: 134746821
NCBI-ProteinID: XP_063537455
LinkDB
Position
13:complement(16297007..16299914)
AA seq 348 aa
MPELEKRKADDYSVVPAKKTRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHLGEIF
TARYHPEGKHLASAGFDRQIFVWNVYGQCENIMVMKGHTGAIMEINFSPDGSHLYSCATD
NTVAVWDVPTGTRVKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDSRKRNPIASF
DSEYPVTAVLFNDTAEKIISGGIDNVVKVWDIRTNKISYKIKGHTDTITGLALSYDGSYL
LSNAMDSTLRIWDVRAFAPTERCVKLLAGHHHNFERNLLRCAWSPDGSKVTAGSSDRFVH
VWDTTSRRVLYKLPGHRGAVTDARFHPAEPVILSASSDKLLYQGEIEP
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgcctgaattagagaaacggaaagcggatgactattcagtcgtcccagctaaaaagacc
cgacatgaaatatcagtggtcggaacaagagaaaaagctgtggttacttcgtcggtacca
cgcacatcgaacctctatgcgcctattatgttgctggagggtcacctaggagagatattt
accgccagataccaccctgaaggcaaacacttagcttccgctggatttgatagacaaatc
tttgtatggaatgtctacggacaatgcgagaacataatggtaatgaaaggccacacgggt
gccatcatggagatcaacttctctccagacggttcacacttatactcctgtgctacggac
aacacggtggccgtgtgggatgtcccgaccggcactagggttaagaaactgaaggggcat
gctaactttgttaactctgtgtcaggagcccgacgcgggcccgagctcctagtctctgcc
tcagatgacaacaccatcaaactatgggactccagaaaaaggaaccccatcgcctccttt
gacagcgagtacccggtcacagcggtccttttcaatgatacggctgagaaaatcatatcg
ggaggcatcgataatgtcgtcaaagtgtgggatattagaactaacaagatttcgtataag
attaaaggacatactgatactattactggtctggcgctctcctacgatggttcctacctc
ctgtcgaacgccatggacagtacgctccgcatctgggacgtccgcgcgttcgcgcccacc
gagcgctgcgtcaagctgctcgccggacaccaccacaacttcgagcggaacctgctgcgc
tgtgcctggtctccagacggttccaaggtgacggcgggctcgtcggaccgcttcgtgcac
gtgtgggacaccacgtcgcgccgcgtgctgtacaagctgcccggacaccgcggcgccgtc
accgacgcgcgcttccatcccgccgagcccgtcatactgtccgccagcagcgacaagctg
ctctaccagggcgagatcgaaccgtag

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