Cydia strobilella (spruce-seed moth): 134746845
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Entry
134746845 CDS
T10503
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04140
Autophagy - animal
cstb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134746845
04148 Efferocytosis
134746845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cstb04131
]
134746845
Membrane trafficking [BR:
cstb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134746845
Hops complex
134746845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
zf-C3HC4_2
Clathrin
zf-RING_2
Beta-prop_EML_2
zf-rbx1
NPF
zf-C3H2C3
VPS11_C
zf-RING_5
zf-C3HC4
Beta-prop_IFT140_1st
zf-ANAPC11
zf-RING-like
WD40_Prp19
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
134746845
NCBI-ProteinID:
XP_063537483
LinkDB
All DBs
Position
13:complement(12509390..12532476)
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AA seq
1083 aa
AA seq
DB search
MAFLEWRRFTFFDVHRKIDNGKVAENLQDTTITATTSGNSHVVLCDSTGWTHLVSRSWNV
TFFKAYELRVTLAQQLPHDPLLVTIGEDEASAPLVKVWDWSRRDRHDNPTCVRVSRAVPS
HMRATPATALAVHDNKNLLAVGFQDGSVTLYRGDIARQRSGKMKTLMDSGTSPITGLAFS
GADKLFVVSRASVLVYWLGTERCVTLDSKGALAGCSVHDRHRFTVAKDDAIFSYTSEGRG
PCYAIEGEKVRLARFHSYLVITTTAAKHAHRLTILDIQNKFIVFENTFEEIEAVLTEWGS
IYILTKNKEMIYLAEKDLHSKLWLLFKKNLYDVAIRIASGQQYDAVGLTEIYKQYGDHLY
GKGDLKGAIEQYIKTIGWLETSYVIRKYLESRHLEPLVLYLEELHKKGVATEDHTTLLLT
CYVKLDQHDQQGKLKEFINSKDKIIEFDVDVAIKVVRQVSIDDALTLAANHKRHDWYLKL
MIEDKKAYSEALQYLSDLEFDDADAYMKKYGLKLIQHLPEESTEFLITLCTDYKPRNKPL
VDEAALTGGYREPERANPDDYIHMFLSNSEQLIHFLEHMTKAESQSSTLVYNALIEHYIH
VWAKSPAEKKAEYEEKIMKVLQDPMANYDKDQTLVICQMLGFRSGMLYLYEENKLWRAQV
ALHMRAGMPERALGVCRRRGGAAPRLWLDVLWWPVRAAPASAPAPAPAPAPAPTPILPEL
LHVIATEKLLSPILVIDCLANVPSYTLGDVRKYLTDVLKSEDDVITREQELAAKYKGESE
RMKAQIHTLQHEPVPFQSSKCAACNRPLELPSVHFLCQHSFHQHCFQSYSDSERDCPACD
KRTRREPPPPAAESLHARLHQEHDPYAVVSEYYGRGLFNKLTVITDAQEPAAPTPAPAAP
GAPWPAPAGPGAPRPGPAGPGAPRPGPAAPGPPGAAAASYGPGAEAKLRLQEGQSKQVFV
PNASKQVAPKGTSVIPVPEGRMRLIEQQQYSSSLEANISRLEPRVHNPTKTSPLASPMSN
RKMEPKSLRQSPKISSAISNGANKNPFEEAYDDTKNPFADDENDPMNPFEEDDDYDKNLN
PFS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttagagtggcgtcgttttacattttttgatgtacacagaaaaattgacaat
ggaaaagtggcagaaaatttacaagatacaacaataacagcaaccacaagtggcaactct
catgtggtgctgtgtgacagcacgggctggacccacttggtgtcccgctcctggaatgtc
actttcttcaaagcgtatgaactcagggtcacactcgcccaacagttacctcatgaccca
ttgttggtcactattggagaagatgaagcgagtgcgccactggtaaaagtatgggactgg
tcgcgccgcgaccgacatgacaacccgacatgcgtgcgagtgtcgcgcgccgtgccatcg
cacatgcgcgccacgcccgccaccgcgctcgccgtgcacgacaacaagaacctgcttgct
gtgggcttccaagatggttcagtaacgttataccgaggggacatagcccgtcagcgctcc
ggaaagatgaagactctaatggactctggaaccagccctatcaccggcctcgccttcagt
ggcgcagataaactgttcgtggtgtcccgcgccagtgtgttggtgtattggctgggcaca
gagcgctgcgtgacgttagacagcaagggagcgttggccggctgctcggtacacgatagg
caccgcttcaccgtggccaaggacgacgcaatattcagctacacgagcgaagggcgcggg
ccctgctacgccatcgaaggcgagaaggtccgcctggcccggttccacagctacctcgtc
atcaccaccacggcggccaagcacgcgcaccggctcactatactcgatatacagaataag
tttattgtcttcgaaaacacttttgaagaaatcgaagccgtcctaacagaatggggctca
atctacatcctcacgaagaacaaagagatgatttacctggcagagaaagacctccactcg
aaactttggctgctgttcaaaaagaacctctatgacgtcgcgataaggatagcgagcggg
cagcagtacgatgcagtggggctgacggaaatatacaagcagtatggtgatcatttgtat
ggcaagggtgacctaaaaggtgctatagagcagtatatcaaaacgatcggctggctggaa
acctcatacgtcatcaggaagtacttggaatcccgccatttggaacctctagtgttatat
ttagaagagttgcataaaaaaggtgtggctacggaagaccatacaacgctattgctgact
tgttacgtcaagttggatcagcatgatcagcaggggaagttgaaggagttcattaattcc
aaggacaaaatcattgagtttgatgtggatgtggctattaaggtagtccgccaagtcagc
atcgacgacgcccttaccctcgcggccaaccacaagcgccacgactggtacctcaaactc
atgatagaagacaagaaagcatacagcgaagcattgcagtacctgtctgacctcgagttt
gatgacgcggacgcttatatgaagaaatacggcttgaagttgatacaacatctacctgaa
gaaagcacggagtttcttataacactatgcacggactacaagccccgcaacaaacccctg
gtcgacgaggccgccctgaccggtggctacagagaacccgagcgagccaaccctgatgac
tatatacacatgtttctgtccaactcggagcagctcatacacttccttgagcacatgacg
aaggcggagtcgcagagctctacgctcgtgtataatgcgcttatagaacattatatacat
gtgtgggcgaagtcccccgccgagaagaaggcagaatacgaagagaaaataatgaaggtg
ctacaagaccctatggccaactacgacaaggaccaaacattagtcatctgccagatgctg
ggcttccgatctggcatgctttatctgtatgaggagaacaaactatggcgcgcacaagtg
gcgctccacatgcgcgcaggcatgccggagcgcgcgctgggcgtgtgtcgccgccgcggg
ggcgcggcgccgcgcttgtggctggacgtgctgtggtggcccgtgcgcgccgcacccgca
tccgcacccgcacccgcacccgcacccgcacccgcacccacgccaatactaccggagctc
ctacatgtcattgccaccgagaaacttttatctcctattctagtcatcgattgcctagca
aacgtgccttcatacactcttggagatgtccgcaagtacctaacagacgtgctcaaatcc
gaagacgacgtgataacccgcgagcaagagctagctgccaagtataagggggaaagcgag
cgaatgaaggcccagatccacacattacaacacgaaccggtccccttccagagctcaaag
tgtgctgcttgcaaccgtccgctggagttacctagcgtgcactttttgtgtcaacattcc
ttccaccaacattgtttccaaagctactccgactcggagcgcgactgccccgcctgcgac
aagcgcacgcgccgcgagccgccgcccccggccgctgaaagtttacacgccaggctgcac
caggaacatgacccctatgcagtggtatccgagtactacggccgcggcttattcaacaag
ctgacggtaataaccgacgcccaggagccggcggcgcccacaccggcgcccgcggctccc
ggggcgccctggccggcccccgcaggtcccggggcgccccggccgggccccgcaggtccc
ggggcgccccggccgggccccgcagcccccgggcccccgggcgccgccgccgctagctac
ggaccaggcgcggaggctaaactaagactgcaggagggacagagcaagcaagtattcgtg
ccaaacgccagcaagcaagtagcaccgaaagggacctccgtgatccccgtaccagaaggg
cgcatgcgcctcatagaacaacagcagtacagctccagccttgaagccaacatctcccga
ctagagcccagagtccacaaccccaccaaaacctcccccctagcctcacctatgtctaac
agaaaaatggaaccgaaaagcctacgacaatcaccaaaaatatcatcagctattagcaat
ggagcaaataaaaacccatttgaagaagcgtacgatgacacgaaaaacccctttgctgat
gatgagaatgaccccatgaatccgtttgaggaggatgatgattatgacaagaatctgaac
ccgttctcgtga
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integrated database retrieval system
