Cydia strobilella (spruce-seed moth): 134747795
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Entry
134747795 CDS
T10503
Name
(RefSeq) uncharacterized protein LOC134747795 isoform X1
KO
K14284
nuclear RNA export factor
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03008
Ribosome biogenesis in eukaryotes
cstb03013
Nucleocytoplasmic transport
cstb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134747795
03015 mRNA surveillance pathway
134747795
03008 Ribosome biogenesis in eukaryotes
134747795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134747795
03009 Ribosome biogenesis [BR:
cstb03009
]
134747795
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134747795
mRNA cycle factors
Stress granule specific factors
134747795
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
134747795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
134747795
NCBI-ProteinID:
XP_063538502
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All DBs
Position
15:4032600..4077153
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AA seq
1315 aa
AA seq
DB search
MSTNLINIQLTGEGANVKNEPNNKNKKVPPIGNKKQNQPFTLNKKKKKNKINNLQNFNNT
TPAQFFAPHQGPNYFVPPNLAQNVGAPSSYTMPGMHQNMIGQNAQHTLRPQALGPKKARR
KLNLIFYIQQAAAAADPAEKERIALEMSKVEQLDSELQKYYKLVSINKSILNQNAQPAPP
PQALGHKKSTRMLKLRSQIQDAAAAASQAEKKRIAWEMSIVDRLDSEIDKYYKLCTIKSS
IFKQRIIGIPTKKCLYLINTIKKSAATAIQTEQERIAWEMSKIEQMDSSEQKFQHLVKLK
KSLDIGNKSRTFTKTADPAALKQQKPVTTTLTAPAINEDFTQDIVTPAQSFQQQHNQSHV
VNPNIIPTRRGGQNKKKNTVQNMHVFDNYKHGGSTSQFQAPHQDEPEDLSDDLAPHMGQG
QQQPGTQTLPVTVENKLNFKFQRTTQTKTQDWSEYQNKFKRIGGASPDHDEEGSQEVKQE
LNKDQSFNTGLNTNLRTQIPSISQQTFTATQQKPAVATKVELKTTRKSTEIPLKPIDVRV
RNANAGYTVPQPAPNMHSNIHLSKLSYETYPKGIPKSFLPQENNPVAPHPIPGCSFPAGI
PRSFLIQEQQRLQEMPQPIPLQIPADPNYQRQPAFMDLPSWILPSQPPEPPQQIHEHLSP
NVGPPMLPFVQQERVERPYSPTDVYSEIQMADDEPREGSESPDLLQSNQKRQSAFSRLGP
LTQPKKPKLTINLQLNKDQAVREVVNETDESFRYVPVHLRKDILESEDEIVKKYLPFWPW
KKNFQLRKTVSARISKSVMILEQEQMEAGYERDNVFIQVVVTGYPKTWTKEDVLDAVLDC
VKGKSFIPLFTEFTSQKCRFLVIRCQSALVAIHKVGFCIRKDDVELTLSISLTDTGLNQI
DLIPRLVLRRRLMIMSDENNVDLTEFLIEKDVSHFVYFPLNRATNQMELIQLQSAVTWEH
LTELNLSRNRLTSIDGFDLHKNTPRLKRLDISQNYLDKVTLLLPIRGLPLRSLRLEGNPL
CRDYIDPGHYIKVVRMMFHEVMELDGVRITLKGDLPSMKRNYCPEAAAAVVEKFLETFFP
LLEAADDDRAAIEDLYDKDAVLTITFRYKLRYGTAFRYFRNLFLRARSLEEGEKDSVVGA
GSITSLICKWPDIEHDRYTISVDVIHHDDFTTILRLGGVLKLTAKSLAEDEHLLTFTRTV
VLHSKNGAEYKITNEMLYWDVPREEVTKTAFNVTTVRPKQLSLKLESPPDEELKSKLTDI
FVKLADIDKKRGARCLELKNWDLRSALDYYIMLLKVDDLAPLSSPKDCTPAPQAS
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaaatttaattaacatacaattgactggagaaggcgccaatgtcaaaaacgag
cctaataataaaaataaaaaggtacctcctataggaaataagaagcaaaatcaaccattt
acattaaacaaaaaaaagaaaaaaaacaagataaataacttacaaaattttaataataca
accccagcccagttctttgctccgcaccagggaccaaactactttgtacctccaaatctg
gctcaaaatgtgggggcaccaagttcatacacaatgcctgggatgcaccaaaacatgatc
ggacagaatgctcagcacacgctacgtccacaagcacttggacccaaaaaggctagaaga
aagttgaacttgatattttacatacagcaagctgctgctgctgctgacccggcagaaaaa
gagagaatagcgttggagatgagtaaagtagagcaactggactctgaattacagaaatac
tataaattagttagtattaacaaatcaatactgaatcagaatgctcagcccgcgccacct
ccacaagcacttggacacaagaaatctacaagaatgttgaaactgcgatcccaaatacag
gacgctgctgctgctgctagccaggcagaaaaaaaaagaatagcgtgggagatgagtata
gtagacagactggactcagagatagacaaatactataaattatgtacaattaaaagttca
atatttaaacaacgaatcattggaatacctactaaaaagtgtttgtatttgataaacaca
ataaagaaatctgccgctactgctatccagacagaacaagagagaatagcgtgggagatg
agtaaaattgaacaaatggactcatcagagcagaaattccaacatttagttaagcttaag
aagtcattagacataggcaataaatcaagaaccttcacaaaaacggctgatccagcagcg
ctaaagcaacaaaaaccagttacaacaactttaacagcaccagcaataaatgaagacttc
acacaagacattgtgacaccagcacaaagtttccagcagcaacataaccagtcccatgtt
gtcaacccaaatataattccaaccagaagaggggggcaaaacaaaaaaaagaacactgta
cagaatatgcatgtgtttgacaactacaaacatggcggtagtacgagccagttccaagcc
ccgcaccaagacgagccggaggacctgtcagacgatctggccccgcacatggggcaggga
cagcagcagcctggtactcagaccctgcccgttacagtggaaaataaactaaactttaag
ttccaaagaaccacccaaacaaagactcaagactggtccgagtaccagaacaagtttaag
cggattgggggcgcctctccagatcacgatgaagaaggcagccaggaggtcaaacaggaa
ctcaataaggaccagtcttttaatactggattaaataccaacctccgaacacagatccct
tcgatcagccagcaaacattcacagccactcaacagaaaccagcagtcgctacgaaagtc
gaactaaaaacaactcggaagtcaacagagatacctttgaagccaatagacgtgcgagtg
cggaacgcgaacgcgggttacaccgtaccccaacctgcccctaatatgcacagtaatatt
catctgtccaagctgtcctatgaaacctacccgaaaggtataccgaaatcatttttgcca
caagaaaataatcccgttgctccacatccgatcccaggttgtagctttccagcaggtata
cctcgatctttcttaatccaagaacaacaaagattgcaagagatgccacagcccatacct
cttcagatcccagcagaccccaattaccaacgccaaccagccttcatggacctaccaagc
tggatcttgccgagccaaccccccgagcctccacaacagatacacgaacacttgtcgcca
aacgttggtcccccaatgttaccatttgtgcagcaggagcgtgtagaacgtccgtattcc
cctactgacgtgtattcggagattcagatggctgatgacgaaccccgagagggctcagag
tcgccggacctcctccagtcgaaccagaaacggcagagcgcgttctctcggctcggcccc
ctgacgcagcctaagaagcccaaactcactatcaacctgcagctgaataaggaccaggct
gtcagagaggtggtgaacgaaacggacgagtcgttccggtacgtgcccgtgcacctccgc
aaggacatactcgagagtgaagacgagatcgtcaagaaatacctgcctttctggccgtgg
aagaaaaactttcagcttcgtaagaccgtctccgctaggatatctaagtctgttatgatt
ttggaacaagaacagatggaggcgggatatgaaagagacaacgtgtttatacaagtcgtg
gtaacaggatacccaaagacatggacgaaagaagacgttctcgacgcagtcctagattgc
gtgaagggcaagagcttcatccctctattcacagagttcacttctcaaaaatgcaggttt
cttgtcatccgctgccagtctgcgttggtcgccatacataaagtcgggttctgcatacgt
aaggacgacgtcgagctaacgttaagcatatcgctcacagacacaggactgaatcaaata
gatctaatccctcgcctcgtcttacgcagaagactgatgatcatgtcagatgagaacaac
gtggatctcaccgagtttcttattgaaaaggatgtaagccacttcgtgtatttccctcta
aaccgtgctacgaatcagatggaactgatccagctacagagcgccgtgacgtgggagcac
ctcaccgagctcaacctgtcgaggaacaggctcacttccatcgacgggttcgaccttcac
aagaacacgccgcgcctcaagcgtctcgacatatcccagaactacctggataaggtcact
ctactgctacctattcgcggcctaccgctccgttcgctcagacttgagggcaatcctctg
tgccgcgactacatcgatcctggccactatatcaaggtcgttaggatgatgtttcatgag
gtcatggagttggatggtgtccgtatcactctaaaaggcgacctaccgtcaatgaaacgc
aactactgcccggaggccgcagcggccgtcgtcgagaagtttctagaaacgttcttcccc
ctgctcgaggcggctgacgacgaccgagccgcgatcgaggacttatatgacaaagatgct
gtcttgactatcacgtttagatataaattacgttacggaacagcattccggtacttccga
aacctattcctccgcgcccggagcctagaagagggagagaaagacagcgtggtgggcgcc
ggctccataacctccctcatctgcaagtggcccgacatcgagcacgacagatacaccatc
tctgtcgacgtcatacatcatgacgacttcacaacaatcctccgcctcgggggcgtgctc
aagctcacagccaagtccttggccgaagacgaacacctcctaaccttcaccaggaccgtg
gtgctgcactccaagaacggggcggagtataagatcaccaacgagatgctgtactgggac
gtgccgagagaagaggtcacaaagactgccttcaatgttaccacggtacggccgaagcaa
ctaagtctcaaactggagtcgccaccagatgaagagctaaagtctaaactaaccgacata
ttcgtcaaattagcggatattgacaaaaaacgcggggcaagatgcttggaactaaaaaat
tgggatcttcggagcgcgctggattactacatcatgcttctcaaggtagacgatctagcg
ccattgtcgtcacctaaagactgcacgccggcaccacaagcgtcgtaa
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