Cydia strobilella (spruce-seed moth): 134748020
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Entry
134748020 CDS
T10503
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03008
Ribosome biogenesis in eukaryotes
cstb03013
Nucleocytoplasmic transport
cstb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134748020
03015 mRNA surveillance pathway
134748020
03008 Ribosome biogenesis in eukaryotes
134748020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134748020
03009 Ribosome biogenesis [BR:
cstb03009
]
134748020
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134748020
mRNA cycle factors
Stress granule specific factors
134748020
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
134748020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
YsaB
Motif
Other DBs
NCBI-GeneID:
134748020
NCBI-ProteinID:
XP_063538799
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All DBs
Position
15:9674077..9689368
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AA seq
618 aa
AA seq
DB search
MPKRGGGKPRNLRGGLDHYEHDDRTHSNLTRRVSFKPGAFKGKGKFRGFNDPKLLLDDDI
DMGANSGGPGHMNNRKGGFRGRGGRLTPTPRRPGGPRRFIPGPIPWYQIVIPYGGKHPKE
VILKALLGFISPEVFIPHYYKINGNAAVFYVDDVKVAEKLFYTDRKIVMSDGFKLVVMVR
NTAPNVQIDAEMKEKMKLVMAKRYNAATKALDLTKFHADPDLADIFCALFRPQIMLAAID
IMAENIPDLEALNLNDNKMHGIEHLKILANKLKSLKILYLGDNKIPYIGSLDCLKSLPLV
ELYLKGNPLVTRCSDHDIYVSDVRKKFPKLVRLDGVDLPPVIGFDVAEDSALPPRKQSFL
VDEGGKDLVRDFLTQYFAIYDSDSRQPLLDAYHEHAHMSMAASYLTYDGRSNSAGTKLTS
YITNSRNIIRIQDRDSRRRYLRTGKLQVVSFLSDLPKTQHDLLGFAVDLPVFTPTMIVLV
MNGVFKETSVAGTPTRSFHRTFVIVPNANGGFCVMNDMLFITNTTKDQEEQAFSSGAPIA
PAPAAAPAQAQAQAALAPPAAPADDQAALLNMLSQQTGMNHHWTMNCLQETGWDYQRALL
IFNQLHAEGKIPPEAFVK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtggtggtggaaaacctagaaatttgagaggtggtcttgaccattatgaa
cacgatgatcgcacgcacagtaatctcacgcgccgcgtcagtttcaagccaggagcattt
aaaggcaaaggaaaattccgaggttttaatgacccaaaactattactcgatgacgacatt
gacatgggcgccaattccgggggtcccggacacatgaacaaccgtaagggcgggtttagg
ggccgtggaggccgactgacgccaacaccacgccgtcccggtggccctagaagattcata
ccaggtccgattccctggtaccaaatcgtcattccatatggaggcaagcatcctaaagag
gttattttaaaagctttgctaggcttcatatcaccagaagtgttcataccccactattac
aaaatcaatggcaatgctgctgttttttatgtggatgacgtgaaagttgcagagaaacta
ttttatacagacaggaagattgttatgtctgatggttttaagctggttgtcatggtccgg
aatactgctccaaatgtacaaattgatgcagagatgaaggaaaagatgaagcttgtaatg
gcaaagagatataatgctgctacaaaagcattagacttaactaagttccatgctgatcca
gacctagcagacatattttgtgcactgttccgtccacaaataatgctggcagccatagac
atcatggctgagaacattccggacctagaagctctaaatcttaatgacaacaaaatgcat
ggcattgaacacttgaaaatcctagcgaacaaattgaagagtctgaagattttgtatttg
ggagacaacaagataccttacattggatcactggattgcctgaagtcactgccgctagtg
gagctgtacctcaaaggaaacccactggtcaccaggtgtagtgaccatgacatatatgtc
agcgatgtgcggaagaagttccccaagctcgtcagattggacggcgtggacctccctcca
gtgatcggtttcgacgtcgccgaagactctgcgttaccacctcgaaaacaatccttcctc
gttgacgagggggggaaagatctcgtccgcgatttcctgacacagtacttcgccatatac
gactctgactcgcggcagccgctgttagatgcgtaccacgagcacgctcatatgtcgatg
gctgcgagctacttgacctatgatgggaggagtaattccgcggggaccaaactaaccagc
tacataacaaacagccgcaacataatccgcatccaagacagagactcgcggcgccgctac
ctgcgaacaggcaagctgcaggtggtgtcgttcctctctgatctacctaagacccagcac
gacctgctgggcttcgctgtggacttacctgtctttactccgaccatgatcgtcctagta
atgaacggcgtgttcaaggagaccagcgtagcgggcacccccacccgctccttccatcgt
accttcgtcatcgtgcccaacgccaacggcgggttctgcgtcatgaatgacatgctgttc
atcaccaacaccaccaaagatcaggaggagcaagctttctcatccggcgcgcccatagcg
ccggctccagccgcggcgccggcgcaggcgcaggcgcaggcggccctcgcaccgcccgcc
gcgccggccgacgaccaggccgcgctgctcaacatgctgagccagcagaccggcatgaac
caccactggaccatgaattgcctacaagaaaccggctgggactaccaaagagccctgctg
atcttcaaccagctgcacgccgaaggcaagataccgcctgaagccttcgtcaagtga
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