Cydia strobilella (spruce-seed moth): 134748190
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Entry
134748190 CDS
T10503
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03013
Nucleocytoplasmic transport
cstb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134748190
03015 mRNA surveillance pathway
134748190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134748190
03041 Spliceosome [BR:
cstb03041
]
134748190
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134748190
Spliceosome [BR:
cstb03041
]
Complex C
Other components
EJC/TREX
134748190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
RSB_motif
HHV-1_VABD
Motif
Other DBs
NCBI-GeneID:
134748190
NCBI-ProteinID:
XP_063538973
LinkDB
All DBs
Position
16:16500475..16505199
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AA seq
424 aa
AA seq
DB search
MGTEVALSFTALRAQLESERSSLYKIDANIKKIVQTTGRFSNDRFNNSSNDYLKGGPRLG
GRNSFPDARQNDDSFGKRKQETKTVFSRLSARTAGSDDEESGGKRPRVISQVSRELPTRA
AVLRAQGGDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTQEDKKAQVERKIEEQARVQKE
KEQKERKTLFAEREHKKATIKALEAKMARVQEFEKWEASQKSLGNFILTRAKPHVYWIPK
KMTDKATEKLNSSRKYHEKCMVKKRLELQEELQRIEQRCLRARGPQAKENEPAPGGGGQE
AGGGGQEAGGGGQEARGGGAGGEQRRDKFAPDAEHKDKEDSDGDGDGEDHHEHIEEQNEE
RQGNGDAEVKDEPVTDETKLDKTTEQNATMEAEEKRDDSHMSVDTSDLFLRPSVEGPPEP
TEES
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggacagaagtagcattatcgtttacggcacttcgtgctcagttagaatcggaacgg
agcagcttgtacaaaatagatgcaaacatcaaaaagatagtgcaaacgacgggtcgattt
tctaacgataggtttaataactcatctaatgactacttaaaaggtggaccacgtttagga
ggccgaaattcattccctgacgctagacaaaatgacgattcttttggaaagagaaaacaa
gagaccaaaacagtttttagcagattatcagcgcgcacagcaggcagtgacgatgaagag
tccggcggcaagcgtccacgtgtcatctcccaagtgtcccgcgagctgccgacgcgcgcg
gccgtgctgcgcgcgcagggcggcgacgagcaggcgcgcacgcgcaaccgacggatcttt
ggctcgctgctcgggacgctgcagaagtttaaacaggaggagattgtgctgcaaactcag
gaagataaaaaggcacaagtggaaagaaagatagaagagcaagctcgggtacagaaagaa
aaggaacagaaggaaagaaagaccctctttgccgagagagaacacaaaaaagccacaatc
aaagctctcgaagccaagatggcgcgagtgcaagagtttgagaaatgggaggcgtcacag
aagagcctgggtaactttatactgactcgtgccaagccgcacgtgtactggataccaaag
aagatgaccgacaaggccacagagaagctgaactccagtagaaagtatcatgaaaagtgc
atggtaaagaaacgcttggaactgcaagaggagctgcaacggatagagcagcgctgcctg
cgcgcgcgcgggccccaggccaaggagaacgagcccgccccggggggaggggggcaggag
gcggggggaggggggcaggaggcggggggaggggggcaggaggcgaggggcgggggcgcg
ggcggcgagcagcgccgggacaagttcgcccccgacgccgagcacaaggataaggaggac
agcgacggggacggggacggggaggaccaccatgagcatattgaggagcagaatgaagag
aggcagggcaacggagatgcggaggtgaaagacgagccagtgacagacgaaactaaactg
gacaagaccacagagcagaacgcaacaatggaagctgaagagaaacgagacgattcccat
atgtccgtggacaccagtgacctatttttacggccaagtgtggagggcccgccggagccc
acggaagagtcctga
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