Cydia strobilella (spruce-seed moth): 134748237
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Entry
134748237 CDS
T10503
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04137
Mitophagy - animal
cstb04140
Autophagy - animal
cstb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134748237
04137 Mitophagy - animal
134748237
04148 Efferocytosis
134748237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cstb03000
]
134748237
Transcription factors [BR:
cstb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134748237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
134748237
NCBI-ProteinID:
XP_063539027
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Position
16:complement(6269800..6386863)
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AA seq
977 aa
AA seq
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MVIHGYGNNVPLQCPVVGRMEDIGWNLQCPMTGQWSRQPVNNVALSAPSVYREIPPVECY
PGSYYAPKAQYFPPQVAYPRTVPQYQAPIMPNLPCNQAQEWDYGSMCYNVNGQPCQYTNV
VDLEDFMNNEKRKEKSRVAARCRRTKEMQIFSELMEQLPAKKEEVEQLDKASVMRLAISY
LRARDVVSLLPNATQDQPKMENPKGVEELSSELSYMKALDGFVLVLSQQGDIVYCSENIA
DHLGVSQMEIMGQSVFEFSHPCDHDEIREALRSNGQQDGRRDLLLRLKCTLTSKGRNVHL
KSASFKVIHVTGHMLVPPETKKPEKSEGEDKKDENSAKLPSLVAVGRPIPHPSNIEIPLD
SKTFLTKHSLDMKFTYIDETLTKTLGFGKDELVGHSLYDYHHSADCASLVHQFKSLFSKG
QCETGQYRFLAKTGGYAWVQTQATVITDKQQKPVSVVCVNYIISAIECKDEVFSAHQLQH
ADLKLLSVPPAAFEPPANGAIVAVVPATEEIFAPREKNMNKGYLSLAQSKGHTMLKDEPD
EEDLTYLAPTAGDTCIPLENSPFDMFDDFILTDNYCSLLGDDLANGSPVDSLTADSLLLS
SPEPQESDSSCEQSSVLTELSLDALDSVRSDNEIDDGHSPFIPLTDELPVLEPAVMWAAF
PDNVSMARPQPTTTQTQQSTSPAPALQRLLAAPPTGPPPQDLITSIYSDQGLIPSRSVSS
WETGVKRVLNQEEEPRAKRTKRSPSPALEVRSTPSSSVLMNLLDVPQPMQVNPGLYRLVV
NQEMPINNIVPAPVMNLMQKPLKHIHNSNLIPSSNLIPKSNMIPSNLIPTSNLIPKSNMI
PTQNLIRKVTNPMSPLTLNVESPMYSLPSSPNTPNYSPAMSPAQRERVLSPYRPQSVSPV
GKFKQMYSPGRLLSPIGVIHGSDPYLTNKMIPSPNYPQQVDMLIDNNIGLTSNDFWTDTE
MLTETNLLEALDDVKLV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggtaatacacggttacgggaacaacgtccctctccaatgcccagtcgtgggccgcatg
gaggatattggatggaatttgcagtgtccaatgacaggccagtggtctagacagccagtg
aacaatgtggctcttagtgctccgagtgtttaccgtgaaatccctccagtggagtgctat
cctggaagctattacgcccctaaagcgcagtattttcctccccaagtggcatatcctcgg
acggttccacaataccaggcgcctattatgccaaacttaccgtgtaaccaggcgcaagag
tgggattatgggagtatgtgctacaacgtgaatggccagccttgccagtacaccaacgtt
gtcgacttggaagattttatgaacaatgagaaacgcaaggagaaatcccgcgtcgcggcg
agatgtcgccgcacgaaggagatgcagatcttctcggagctgatggaacagttgcccgcc
aagaaggaggaggtggaacagctcgacaaggcctccgtgatgcgtctcgctatatcctac
ctcagggcccgtgacgtggtttcactgctccccaatgctacgcaggaccagccgaaaatg
gaaaaccccaaaggcgtggaagaactgtcttcagagctgtcctacatgaaggctttggac
gggttcgtcctcgtgctgtcccagcaaggcgacatcgtttactgtagtgaaaatatcgcc
gatcaccttggtgtctcacagatggaaattatgggtcaaagcgtgttcgagttcagccat
ccctgcgaccacgacgagatacgcgaggctctccgctcaaacggtcagcaagatggacgg
cgcgatctgctgctccgtctaaagtgtacgcttaccagcaagggacgcaatgtgcatctc
aagtccgcttctttcaaggttatccacgtaacgggccacatgctggtccccccagagacc
aaaaaacccgagaagtcggaaggagaagacaagaaagacgagaattccgccaagctgcct
tcgctggtcgcagtgggccgtcccataccccatccgtctaatatagagataccgctggac
agcaagacttttctgaccaagcacagccttgatatgaagttcacatacattgatgaaact
ctgacgaagacgctgggtttcggcaaggacgagttggtgggtcattccctttacgactac
caccactcggctgattgcgcatcgttggttcatcaattcaaatcactgttctccaaagga
caatgcgagacaggccagtaccgcttcctcgccaagactggtggctacgcctgggttcaa
acccaggccaccgtcatcacagacaagcagcagaagcctgtcagcgtcgtctgcgtcaac
tacataataagcgctatcgagtgcaaagatgaggtgttctccgcacaccaactccaacat
gcggacttgaagcttctgtccgtaccgcctgccgcatttgagcctccagcgaacggagcc
atagtagctgtggtgcctgctacagaagaaatatttgcaccaagggagaaaaacatgaac
aagggttatctctcgctagcacaatccaagggtcatacaatgcttaaagacgagcctgat
gaagaggatcttacttatctggcgcctacggccggtgacacttgcatcccactggagaac
agtccgtttgatatgttcgatgacttcattcttaccgacaattactgcagcctgttaggc
gacgaccttgctaatggttcacctgtggattccttaactgccgattctttattactgtcc
tcacctgaacctcaggagagtgactcatcatgcgaacagtcgtcagtactgacagaactt
tctctggatgcattagatagcgtaagatcagacaacgagatagacgatggacactcaccg
ttcatccccctcacagatgagttgccagtattggagccggcggtcatgtgggcggcgttc
ccagataacgtcagcatggctagaccacagccgacaaccacacagacgcaacagagcact
tcgccggccccggcgctacagcgcctattggccgcgccgcccacaggccctccgccacag
gatctcattacaagcatatactcagatcaaggtttaataccaagtagaagcgtgtcgtca
tgggagacaggcgtcaaacgcgtgttaaaccaggaagaggagccccgggccaaacgtacc
aagcgcagcccgtccccggctttggaagtacggagcacgccgtcctcgagcgtcctcatg
aacctcctggatgtaccgcagccaatgcaggtgaatccgggcctgtacaggttggtggtc
aaccaggagatgccgatcaacaacatcgtccccgcgccggtcatgaacctaatgcagaaa
cccctgaaacacatacacaattcaaacctcataccgagctctaatcttataccgaagtct
aacatgataccctcaaatctgataccaacttcaaacttgataccgaagtcaaacatgata
ccgacccaaaatctgatacgtaaagtcactaaccctatgtctccacttacacttaatgta
gagagcccgatgtattcgctcccgtcgagccctaatactcccaattacagtccagccatg
agtcccgcccaaagggagcgcgtgctgagcccgtatcgtccccaatctgtgtcgcctgtc
ggtaaatttaagcagatgtacagccccggtagacttctgtcgcccataggcgtcatacac
ggcagcgatccgtatttgaccaataaaatgataccgagtcctaactacccgcagcaagtc
gatatgctcatagacaacaatataggtcttacatcgaacgacttctggaccgatacagaa
atgttgacagaaaccaatcttcttgaagctttagacgacgttaaactcgtctag
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