Cydia strobilella (spruce-seed moth): 134748388
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Entry
134748388 CDS
T10503
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134748388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134748388
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134748388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134748388
NCBI-ProteinID:
XP_063539239
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Position
16:complement(15427059..15436407)
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AA seq
222 aa
AA seq
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MGTDEAKLKDFKLKPMKCELNFLSKSDGSAILSQGSTVALTSVNGPLEVKMSSQSIEKTT
LEVLFTPKGGKPSVKDRYKENVIRQTCEEAILSSLYPRTGITVTVQELEDYGGLLSTCVN
SVCLALINSGVAMRHVFAAVLCCVDECGDILLEPEADQLDAARAVFSFVFDERDKSLVTG
FTEGNFSEDTYREAMERCRSASDLVFAFYRDIVSKYSKIIGG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgacgaagctaaactaaaagattttaagctaaaaccgatgaagtgtgagctg
aatttcctcagtaaatcggacggttctgctattttgtctcaaggtagtacagtagcgttg
actagcgtcaatggacctctggaagttaaaatgtcaagtcaaagtatagagaagactaca
ttggaagttctctttactcctaaaggcgggaaaccttctgtaaaagaccggtataaagag
aatgtgatccgtcaaacatgtgaggaggccatcctgagcagcctgtaccctcgcaccggc
atcaccgtcacagtgcaggagcttgaggactacggagggctcctatcaacgtgcgtgaac
tccgtatgcctagccctaataaactcaggcgtggcgatgcggcacgttttcgccgcggtg
ctgtgttgtgtagacgagtgcggagacatcctcctcgaacctgaggccgaccagctagat
gctgcgagagctgtgtttagcttcgtctttgatgaacgcgacaagagtcttgttacaggc
ttcaccgagggcaatttcagtgaagacacgtacagagaggccatggagcggtgccggtct
gccagcgacctcgtgttcgcattctacagggatattgttagcaaatactcgaaaattatt
ggaggatag
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