Cydia strobilella (spruce-seed moth): 134748398
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Entry
134748398 CDS
T10503
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03013
Nucleocytoplasmic transport
cstb03015
mRNA surveillance pathway
cstb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134748398
09122 Translation
03013 Nucleocytoplasmic transport
134748398
03015 mRNA surveillance pathway
134748398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134748398
03041 Spliceosome [BR:
cstb03041
]
134748398
03009 Ribosome biogenesis [BR:
cstb03009
]
134748398
03012 Translation factors [BR:
cstb03012
]
134748398
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134748398
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134748398
mRNA cycle factors
Stress granule specific factors
134748398
Spliceosome [BR:
cstb03041
]
Complex C
Other components
EJC/TREX
134748398
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
90S particles
Helicases
134748398
Translation factors [BR:
cstb03012
]
Eukaryotic type
Initiation factors
eIF-4
134748398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
UvrD-helicase
TniB
Utp25_C
Motif
Other DBs
NCBI-GeneID:
134748398
NCBI-ProteinID:
XP_063539250
LinkDB
All DBs
Position
16:7823269..7833429
Genome browser
AA seq
405 aa
AA seq
DB search
MTASEASYNRKIISEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ
RSIQPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRAIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtcagaggcttcatacaatcgaaaaatcatatcggaagatttatcaaatgtt
gaattcgacacaagcgaagatgtggaagttattcccacatttgactccatgggtcttcgg
gatgaattgctgagaggaatatatacttatggattcgagaagccttccgctattcagcag
agaagtattcaaccgattgtgaaaggcagagatgtgattgcccaagcccagtcaggcacg
ggtaaaaccgccacattttccatatctatcctgcagtcgttggacacgactcttcgtgag
actcaggttctggtgttgtcgcccactcgcgagttggctacacagattcaaaaggttatc
ctggctttgggcgatttcatgaatgtccagtgccatgcttgcattggaggcacaaacctt
ggtgaagacattaggaagctggattatggtcagcatgtagtttctggaactcctggtaga
gtttttgacatgattagaagacgtgtactccgtaccagagcaatcaagatgctggtcctt
gatgaagctgatgagatgctgaacaagggctttaaggagcagatttatgatgtctaccgt
tacctgccgcctgcaacacaagttgtactcatatctgctactttgccccatgaaatactg
gaaatgacttccaagtttatgacagatcccattaggattttagttaaacgtgatgaattg
acgctcgaaggcattaagcagttctttgtggcagtggagcgtgaggagtggaagtttgac
acactttgtgacctgtatgacacattgaccattacacaagctgtgatattctgcaatacc
aagaggaaggtggactggctcacacagaaaatgcaggaagccaacttcacagtcagctct
atgcatggtgatatgccacaaaaagagagagataatattatgaaggagttcagatctgga
caaagccgcgtgctaatcacgactgatgtatgggcaagaggtattgatgtccaacaagta
tctcttgtcatcaactatgacctgcccaacaaccgtgagttgtacatccacaggattggt
cgttccggccgttttggacgcaagggtgttgcaatcaactttgtcaaatcagatgatatc
agaatcctgagagacattgagcagtactactccacacagattgacgaaatgccaatgaat
gttgctgacctcatttaa
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