Cydia strobilella (spruce-seed moth): 134748709
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Entry
134748709 CDS
T10503
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134748709
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134748709
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134748709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
zf-C2H2_DHX34
OB_NTP_bind
DEAD
HA2_N
AAA_22
AAA_19
Herpes_ori_bp
AAA_14
nSTAND3
AAA_16
XAF1_C
Motif
Other DBs
NCBI-GeneID:
134748709
NCBI-ProteinID:
XP_063539549
LinkDB
All DBs
Position
17:complement(10167832..10189572)
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AA seq
1144 aa
AA seq
DB search
MPRGASLSRHSSKRRSHSREYRDYKQRKTSPGPSTSQPETEFSFENYKRTLNKIILYSSE
SNTVANSLDDFWVFVKKYEATLKKAGKPILEYRTEEKHFSKFNCINFNTKLKYVDVAYDE
KESRKLDKKTFEAFLNVVSIYLDFKNKEKFERLRKLRQAQRDLPVAKYRQEIITAVQNER
VVIVAGDTGCGKSTQVPQYLHDAGFQNIACTQPRRIACISLSKRVAFETLSQFQSKVGYQ
IRFEKSKTADTKICFITEGLLLRQMSSENLPSYDVIILDEIHERHLMGDFLLGVLKCLIH
SRTDIKLVLMSATINIKLFEDYFSAESAVVIQVPGRLFPIELQYKPIFIEDKPTREDRLD
PQPYVQIMQLIDKKYPSDERGDLLIFMSGVQEITAICDAAQQYTEKTKKWIVLPLHSGLS
IAEQDKVFDYPPEGVRKCIVSTNIAETSVTIDGIRFVVDSGKVKEMSYDSTTKMQRLKEF
WISQASADQRKGRAGRTGPGVCYRVYSEKQYNEMDPFSTPEVSRVPLASLLLLMSSLGVS
DVRRFPFVDAPPEQAIENALLELKQHGALTANEKLTALGRALANLPVEVSLAKALVIGSA
TLPPYKRDSALALAAALGIRSIFTTRAHRDFECENARKPDESDHGDPLTLLSLYCAWLSE
KARGGGRAWCRRRGVEEQRLYELTKLAAQLRSLLQDNNLMETPEPESMSSAERSLRHGQM
KQLKNMRRQYKQKAAEEQKRKKRLKVDSWEIVDENANEDNSLDIRDIEFRMTNDAQRIHS
LISGASASSGRDLMTLKVVLCRALYPQIAVADEFNHCKSVSEQLYHTWSKPFVFLHPTSF
FGKQPRVLQLSEADIQTELPAGYKSKLPVSSKHQILCYLSLLETTKPYIVNSMRMPAAQT
LLLLAHSIDTNIGFSRIVCDSWLLLEFPYPETGLNLLMKAAKLRQRWDALINSRLSDANP
DKSVESELKKQPKLNYEQLQHDLSCDLSSYMFSEVYYTIKRLLPGDLKVLYYGPDEAHPN
IDPNPFEEGYECHAHEKKGGVYVTDNIVYNCVVDNDWSYSSYQESYNIPWSCSNCGISVC
LSPLEKLQHTQFTCSLKTEVKTEAPTTTRENKPNAREYQCESCEETLYMTSVEILKHKKS
CKKK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtggtgcaagtctgtccagacattcttcaaagagaagatctcattctagagag
tatcgtgattacaaacagcgtaaaacatctccaggccccagcacttcacagccagaaacc
gaattcagtttcgaaaactataagcgaactctgaataagataattctatacagtagtgaa
agcaatacagtggcaaatagtttggatgacttctgggtatttgttaaaaagtacgaagcg
acgttgaaaaaggccggtaaacctattcttgaatatcgaactgaagaaaaacatttttct
aagtttaattgcatcaactttaacactaagttaaaatatgttgatgttgcttatgatgag
aaagagagcaggaaattggataagaaaacatttgaagcgtttttgaatgtagtgtcaatt
tatttggactttaagaataaggagaaatttgagaggttaaggaaattaaggcaggctcag
cgggatttgccagtagctaaatataggcaagaaataataacggcagtacagaacgagagg
gtggtcatagttgccggagacactggatgtggcaaatcaacacaggtgcctcagtattta
catgatgctggcttccaaaatatagcttgcactcaaccaaggagaatagcttgcatatct
ctgtcaaaaagagtagcatttgaaactctgagccaattccaaagcaaagttggttaccaa
atcagattcgaaaagagcaagactgcagacacgaagatatgtttcatcactgaaggatta
ctgctcagacaaatgtcatccgaaaatttgcccagttacgacgttataatcctagacgag
attcacgaaaggcacttaatgggggacttccttttgggtgtgctgaagtgcttgatacac
agtcggaccgacatcaagctggtgcttatgtccgctactatcaatattaagttgtttgag
gattatttttctgcagaatcagctgttgttatacaggtaccaggtagattgtttccaata
gaattgcagtacaagccgatatttatcgaagataaacctacgcgagaagacagactcgac
cctcagccttacgttcaaataatgcagttgattgacaaaaaatatcctagtgacgaaagg
ggagaccttttgatcttcatgtctggcgtacaagaaataacagcgatttgcgacgcggca
caacagtataccgagaaaacgaagaaatggatcgtacttcctctacatagtggcttgtct
attgccgaacaagataaggtgttcgattatccaccagagggcgtccgaaagtgtatcgtg
tctacgaacatcgcggaaacatctgtcaccatcgatggaattagattcgtcgttgattct
ggaaaggttaaagaaatgagctacgattcaactacaaaaatgcagcggttgaaagagttc
tggatatctcaagcgagcgcggatcagaggaaaggtagagccggaaggacaggccctggc
gtctgctaccgcgtatactccgagaaacaatacaacgagatggacccattcagcacccct
gaagtatcccgcgtacctctagcttccttactactccttatgagctcgctcggcgttagc
gatgtgaggaggttcccatttgtcgatgctccacctgagcaagctatagagaatgctcta
ttagaattaaagcaacatggcgccttaacagcgaacgaaaaactcacagctctcggtcgg
gcattggccaacttgcccgtcgaagtatctttagccaaagccttagtaataggcagtgca
acattgccaccatataaacgagattcagcgctggccttagcagctgctttaggcatacgg
tcgatatttactacaagagcgcacagggattttgaatgtgagaacgcaagaaaacctgac
gagtctgatcacggggatccgttaacgcttctctcgctttactgcgcgtggctgagtgaa
aaggcccgtggtggcggccgcgcttggtgccgccgccgcggggtggaggagcaacgcctg
tacgagttgaccaagctcgctgcgcaacttagaagtcttttacaggacaacaatttaatg
gagactccagaaccggaatcgatgtcttcagctgagaggtcgttaaggcacggtcagatg
aaacagttaaagaatatgagaaggcaatataaacaaaaggccgccgaagagcagaaacgc
aagaaacgcctcaaagtggactcatgggagatagtcgacgaaaacgccaacgaagataat
tcattagatatcagggacatagagttccgcatgaccaacgacgcacagcggatacactcg
ctcataagcggagcgagcgccagcagcggacgggaccttatgactttaaaggtggtatta
tgccgagcactataccctcaaatagcagttgcagacgaatttaatcactgcaagtcagta
tccgagcaactttaccacacttggagcaagcccttcgtgttcctccaccctacgtcgttc
ttcggcaaacagccgagggtgcttcagctgagcgaggccgacatccagacagagctgccc
gccggctacaagagcaaactgcctgtctcctctaaacaccagatactgtgttacttatcg
ctgctagaaacgacgaagccatacatcgtgaattcaatgcgaatgcccgccgctcaaact
ctgctgttattggctcattccatcgataccaatatcggctttagtagaatcgtttgtgat
tcgtggctgttactggagttcccatacccagagacgggacttaatcttctaatgaaagcc
gctaagctacgacagcggtgggatgctctgatcaacagccgattgtcggatgcaaatcca
gacaaatcagtggaatcagaattgaagaaacaacctaaactcaactacgagcagctacaa
cacgatttgtcctgcgatcttagttcttacatgttcagcgaagtttattacactataaag
aggttgcttccaggtgatctgaaggtgttgtactacggacctgatgaggctcacccgaat
atcgaccctaacccgttcgaagaaggctacgaatgccatgcgcatgaaaagaagggaggt
gtatatgtgacggataacatcgtttataattgcgtggtagacaacgactggagttacagc
agctaccaagaatcctacaacattccctggtcctgctctaactgcggcatttccgtctgt
ctgtcccccttagaaaaactacaacacacacagttcacatgctcactcaaaactgaggtc
aaaactgaagcacctacgaccactagggaaaacaaaccaaatgctagagaatatcagtgt
gaaagttgcgaggagactttgtatatgacgtcggtggagatattgaaacataagaagagt
tgtaaaaagaaataa
DBGET
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