Cydia strobilella (spruce-seed moth): 134749009
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Entry
134749009 CDS
T10503
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134749009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cstb03041
]
134749009
Spliceosome [BR:
cstb03041
]
Complex B
Other components
Prp19-related factors
134749009
Complex C
134749009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
RRM_PARP14_3
zf-CCCH_10
RRM_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
134749009
NCBI-ProteinID:
XP_063539967
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Position
17:complement(7413583..7417632)
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AA seq
440 aa
AA seq
DB search
MAVSKSTNTYNRQNWEDSDFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
SRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKIQDDLPRNEVNKEYYIQN
LDSQMSKFDSTQPSNSALKSKGASDLLLRLARTAPYYKRNRPHVCSFWVKGECRRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVAEKLMRRAAAMPALPPPEDRTVTTLYVGNLP
ENISEEELRGHFYQYGEIRSLTLVPRAQCAFVQYTTRSAAEHAAEKTFNRLVIGGKRLTI
KWGKSQGRQGTNEKNETLPALEPVPGLPGALPPAPAFLHPFPPQMPPPHRPNDFFNLHHY
GPAAGWPWGAPPPPPGAGLPPPGLPPPGAGLPPPGAGLPPPGAGLPPPGPGLPPPAPALH
YPSQDPGRLGAHAHANAPQT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtcgaaatcaacgaacacctacaatcgacagaattgggaagattcagacttt
ccaattttgtgccaaacatgcctcggagacaatccgtatattcgtatgacgaaggaaaaa
tatggcaaagagtgtaaaatatgcgctcggccatttacagtcttccgttggtgcccaggg
tctaggatgcgcttcaagaaaacagaagtttgccaaacatgttccaagttgaagaatgtt
tgtcaaacttgcctgttggacttagaatatgggttgcctattcaagttagagatgcggct
cttaaaatacaagatgatctacctcgtaatgaagtgaataaagagtattatattcagaac
ttagatagtcaaatgtctaaatttgattctactcaaccaagcaattctgctctgaagtcg
aagggtgcttctgatctgttgttgagattggcccgaactgcaccatattacaaaagaaat
aggccacatgtgtgttcattctgggtgaaaggcgagtgtcggagaggagaggagtgcccg
taccggcatgaaaagcctactgaccctgatgatccattggctgaccagaacatcaaagac
agatactatggtgtgaatgacccagtagcagaaaagctcatgcgtcgcgctgctgccatg
ccggctcttccaccacctgaggacagaactgtcaccactctgtatgtaggcaacttgcct
gagaacatctctgaggaggagctgagaggacatttctaccagtatggagaaataaggtcg
ctgacattggtgccgcgagcacagtgcgccttcgtgcagtacacgactagaagtgcagcc
gagcatgcggcagagaagaccttcaaccgactggtcatcggcggcaagaggctcaccatc
aaatggggcaaatctcaaggtcgtcaaggtacaaacgagaagaacgaaacgctaccggcg
ctggagcccgtgcccggcctgcctggcgctttgccgccggcaccagccttcctgcatcca
tttccaccacagatgccgccgccccaccggcccaacgacttcttcaacctgcaccactac
ggccccgcggcgggctggccgtggggcgcgcccccacctccccccggcgccggcctacct
ccccccggcctgccccctcccggcgccggcctgccccctcccggcgccggcctgccccct
cccggtgccggcctgccccctcccggccccggcctgccgccgccggcgccggccctgcac
tacccgagccaagatccgggtcgcttgggtgctcacgcgcatgccaatgcgccgcagacg
tag
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