Cydia strobilella (spruce-seed moth): 134749960
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Entry
134749960 CDS
T10503
Name
(RefSeq) protein strawberry notch
KO
K26273
protein strawberry notch
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cstb03036
]
134749960
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134749960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Lys-AminoMut_A
Motif
Other DBs
NCBI-GeneID:
134749960
NCBI-ProteinID:
XP_063541068
LinkDB
All DBs
Position
19:13165121..13231157
Genome browser
AA seq
1355 aa
AA seq
DB search
MSKRAAYGDDEDNPPTPSDDSDFDDDEDPDNLEVPGGGKTLAAAAQLGNKPKVTAAPMPV
TVRATTNPLAAASGLAFGQMANQVKPIKISASALSKPINLGGLPRGGAAAPSPFAAGSSA
AYSAASLLAQMEMAGIPGMNSYLLQNLNQILASGMGGPLAGMLGQFAQLTTPNWGPKAGL
FPQDKMHGDEEEVDDEEMGVAETYADYMPTKLKLGRKHPDPVVETASLSSVEPIDVHYTV
SLPDETIRNGLLSALQLEAVVYAAQAHEHTLPDGTRAGFLIGDGAGVGKGRTIAGIIFEN
HLKGRKRAIWVSVSNDLKYDAERDLRDIGAGKIEVHPLNKFKYAKISSAVNGNVKKGVVF
CTYSALIGETQSNTTKYRTRLKQLLQWCGEDFDGCIVFDECHKAKNLCPVGSGKATKTGL
TALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVEKRGVGA
MEIVAMDMKLRGMYIARQLSFHGVSFKIEEVPLSDAFRETYDKSVALWVEAMQRFTEAAE
LIDAEARMRKTMWGQFWSAHQRFFKYLCIAAKVHHAVVTAREAVKCGKCVVIGLQSTGEA
RTLDQLERDDGELSDFVSTAKGVFQSLVEKHFPAPDRERINRLLGLEGPKKALPTPTPNG
RTPTVTALTGESSKRKLTSRQQANIAAKRARGGSSSDEFIRGSDDEGEAESGDERRRSDS
ESDSNPFRAGSGTDSDTEPWMRKKKPLKKKKAASPKKKPSTTQDKIENMFSRKTSTAPAV
TVAAPSGVLTGTPVGTNGLYLGPARNNQPPPRSAIERACSMKEELLAAIERLAKRLPPNT
LDQLVDELGGTENVAEMTGRKGRVVQTEDGQILYESRSEADVPLETLNLTEKQRFMDGEK
DVAIISEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYI
FLISDLAGERRFASTVAKRLESLGALTHGDRRATDARDLSQFNIDNKYGRTALEAVMKAI
MKYETPLVPPPRDYNGDFFQDIASALVGVGLITNSESAPGVLTLDKDYNNMSKFLNRILG
MPVELQNRLFKYFTDTLNAVMEQAKRSGRFDLGILDLGSAGECVRRVRCVRFVRRHATGT
APVELHTVHSERGMDWTEALEKHSQHDGPKEGFYLSVAQRNGKYTAVLCIAVGNQHARTQ
TKLSKKEQMYQIYRPNTGLQLRLESLAEIEKKYKRVTAEDAETSWRAQHAASLRTCSHAY
WRASCRNAASCEVGLRRRTYHVLSGSVLAVWARVEAVLAQRSQLNKMQVVRIKTDQGLKI
VGTVIPKNCVDPLRETLSSDAVNVSEQSFEQTDLK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgggcagcatatggggatgatgaggacaatccacccacaccatctgatgac
tcggactttgatgatgacgaagacccagataacttggaagtcccaggcggcggcaaaaca
ctggcagccgcagctcagctggggaacaaacccaaagtcacagcggcaccgatgccggtc
acagtcagagctactacaaatccgttagctgccgcatcaggactagcgttcggtcaaatg
gccaaccaggtgaagcctatcaagatatctgccagtgccttgtccaaacctatcaacctg
ggcggcttgcctcgcggtggtgctgccgcgccgtcgcccttcgcggcgggctcgtcggcc
gcgtacagcgccgcctcgctgctcgcgcagatggaaatggcggggataccggggatgaac
tcgtacctgctccagaacctaaatcagatattagcgtcgggcatgggtgggcctttggca
ggcatgcttggacagtttgcacagctcactacacctaattggggacctaaggctggtctc
tttccgcaagacaagatgcacggtgacgaagaagaggtggacgatgaagaaatgggcgtg
gcagagacgtacgccgactatatgcctactaaactgaaactcggacgcaagcaccctgac
cctgtcgtagagacagcctcgctctcctccgtggagcccatcgatgtgcactacaccgtc
agcttaccagacgagacgatacggaacgggctgctatccgctctgcagttggaggccgtg
gtgtacgcggcgcaagcccacgagcacacgctgccggacggcacgagggccggattcctt
ataggtgacggcgctggtgtgggcaaaggccgaaccatcgccggtataatcttcgagaac
cacctgaagggccgcaagcgcgccatctgggtgtccgtctccaacgacttgaaatacgac
gcggagagagatctgagggacatcggggctgggaagattgaagttcaccctctgaataag
ttcaaatacgcaaagatctcatcagcggtgaacggcaacgtgaagaaaggcgtggtattc
tgtacatactctgcgctgatcggcgagacgcagtcgaacacgactaaatacaggacgagg
ctcaagcagctgctgcagtggtgcggggaggacttcgacggatgcatcgtatttgacgaa
tgtcacaaagcgaagaacctctgccccgtcggctcgggcaaggccacaaagaccggcctt
accgctctagaactacaaaacaaactccccaaggctcgcgtagtatacgcttcggccacg
ggagcgtctgaacctaggaacatggcgtatatggtgcggcttgggatatggggagaagga
acaccattccctacgtttatggactttatcaacgctgtggaaaaaagaggtgtcggcgcc
atggagattgtagccatggacatgaaactccggggcatgtacatcgctcggcagctctcg
ttccacggcgtctcgttcaagatagaagaagtgccgctatccgacgccttccgggagact
tacgacaaatctgtcgcattgtgggtggaagccatgcagcggttcacagaggcagcagaa
ctcatcgatgcggaagctcgcatgaggaagacgatgtgggggcagttctggtcggcgcat
cagaggttcttcaagtacctgtgtatcgccgctaaggtgcatcacgcagtagtaacagct
cgagaagccgtcaagtgcggcaagtgcgtcgtgatcggcttacagagcacgggcgaggct
cgaaccctggaccagctggagagagacgacggagagctcagcgacttcgtctccaccgcc
aagggcgtgttccaatccctggtcgagaaacacttccccgcaccggaccgcgagcgcatc
aaccggcttttaggcctcgaggggcctaaaaaggcccttcctacacccacacccaatgga
cgtactcctactgtaacggccttgaccggggagtccagtaagaggaaattaacatcacga
caacaagccaacatagcggcaaagagagctcgcggaggttcgtcttcggacgagttcatt
agaggatccgacgacgaaggagaagcagagtcgggtgacgaacgcaggcggtccgactcg
gaaagcgactccaatccgttccgcgccggatccggcacggactcggacactgaaccctgg
atgagaaagaagaagcccctcaagaagaagaaagcggcgtcccccaaaaagaagccgtcc
accacacaggacaaaatcgagaatatgttctccaggaagaccagtaccgcgcccgcggtc
accgtcgccgcgcccagcggggtgctgacggggacgccggtcgggaccaatgggctctat
ctaggtccggcgcgcaacaaccagcccccaccgcgctcggccatcgagcgcgcctgcagc
atgaaggaagaactcctcgccgccatagagcggctcgccaagcgcctgccgcccaacacg
ctcgaccagctggtcgacgagctcggcggcaccgagaacgtggccgagatgacaggacgc
aaagggcgcgtagttcaaacggaagacgggcagatcctctacgagagcagatccgaagcc
gacgtgcctctggaaacgctcaatctaacggagaagcagcgattcatggacggcgagaag
gatgtagccatcatttctgaggcggcgtccagtggtatctcactacagagtgacaggagg
gcgcgaaaccaaaggcggcgcgtacacatcaccctggaactaccgtggtctgccgacagg
gctatacagcagttcggtcgcacacaccgatccaaccaagtgaacgcgccggagtacatc
ttcctgatctcggacttggccggcgagcgccgcttcgcctccaccgtggccaagcggctc
gagtccctcggcgcgctcacgcacggggaccgccgcgccaccgacgccagggacctcagc
cagttcaacatcgacaacaaatacggtcggacggcgcttgaagctgtgatgaaggccatt
atgaagtacgaaacgccgctagtgcccccgccgagggattacaatggagatttcttccag
gatatcgccagcgcgctcgtgggagtgggactcattaccaacagcgagtctgcgcccggg
gtgctcacgctcgacaaggactacaataacatgtcgaagttcctgaacaggatattgggt
atgccggtggagctgcagaacaggctcttcaagtatttcacggacacgctcaacgccgtc
atggagcaagccaaacgcagcgggcggttcgacctcggcatcttggacttgggaagcgcc
ggcgagtgcgtgcggcgcgtgcgctgcgtgcgcttcgtgcgccgacacgccaccggcacc
gcgcccgtcgagctacacactgtgcattctgagcgcggtatggactggacggaggcgctc
gaaaagcactcacaacacgacgggcccaaagagggcttctacctatcagtagcgcaacgc
aacggaaaatataccgctgtgttatgtatcgccgtagggaaccagcacgcgagaacacag
accaagctcagcaagaaggagcagatgtatcagatatacaggcctaacaccggtcttcag
ctgcgtttagaatccctagcggagatcgagaagaaatacaagcgggtaacggccgaggac
gccgagacatcgtggcgcgcgcagcacgcggcgtcgctgcgcacctgcagccacgcctac
tggcgcgcctcctgcaggaacgctgctagctgtgaggtgggactgagacggcgcacgtac
cacgtgctgtccgggtcggtgctggcggtgtgggcgcgcgtggaggccgtgctggcgcag
cgctcgcagctcaacaagatgcaggtcgtgcgcatcaagaccgaccagggactcaagatt
gtcggcacggtgatcccaaagaactgcgtggacccgctgagggagacgctctcgtcggac
gccgtgaacgtgtccgagcagtcgttcgagcagaccgacctcaagtga
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