Cydia strobilella (spruce-seed moth): 134749993
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Entry
134749993 CDS
T10503
Name
(RefSeq) splicing factor 3A subunit 1
KO
K12825
splicing factor 3A subunit 1
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03040
Spliceosome
Brite
Spliceosome [BR:
cstb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134749993
Complex B
134749993
Complex C
U2 SnRNP specific factors
134749993
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Gene cluster
GFIT
Motif
Pfam:
Surp
PRP21_like_P
ubiquitin
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
134749993
NCBI-ProteinID:
XP_063541119
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Position
2:complement(3009143..3015232)
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AA seq
725 aa
AA seq
DB search
MPSIDMMGPPGQPLDAAPEEPQAPPPPVIGIIYPPPEVRNIVDKTASFVARNGPEFEARI
RQNELGNPKFNFLNSGDPYHAYYQHKVKEIREGKDTGPPPSAGGPPGIRGALAPAQAARQ
QELLKAAAPAEPPPPRDPPPDFEFLADAPSISALELDIVKLTAQFVARNGRQFLTDLMKK
EERNHQFDFLRPQHSLFQYFTRLLEQYTKVLLPPKELTSKLGQEIRTGALDAARGRAAWL
AHQARRRAQDEARVERERLAYACVDWHDFVVVETVDYPAGEPGDFPPPTTPLEVGARVLA
QERGVTAPIDDDTEMQLESESESESDEELSTMEDRTQQQRPDDTRVQDMEEDSSSSEDER
APAPPPPRRPVREEAPLPPRPDRVVVKQYDPKQPRPAPAPPGDEWLVSPITGEKIPASKV
ADHVRIGLLDPRWLEQRDRAAAERSDRDEALAPGAAIEASLKQLAERRTDIFGVGDEETA
IGKKIGEEEKRRDDRVTWDGHTSSVEAATRAARAHITLEDQIQQIHKVKGLLPDEEKEKI
GPKPVTAPPPPRMAPPRPAPPPAPPRPVAPAPVLLQPLPSLMVLPPMAPRPPLIATPVAG
YYAPPVEEEEPAAKRPRTEDTLEPESTWLARHGGGNVGVSVIVPAQPERTEWRLDGRALP
LSISLNASVADLKTMLQRSTNMPIAKQKLQYEGLFFKDSNTLAYYNVPPGAVIQLQVKER
GGRKK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaatagacatgatgggtcctccggggcagccgctagacgcggcgccggaggag
cctcaggcgcccccgccgccggtcatcgggatcatttacccaccaccagaagtcaggaac
attgtggataagacggccagtttcgtagctcgcaacgggccggagtttgaggcgcgtatc
cggcagaacgagcttggcaaccccaaattcaacttcctcaactctggggacccataccat
gcctactatcagcacaaggtcaaggagatcagggaagggaaagacactggcccaccaccg
tccgccggcggcccgcccggcatccgcggcgccctggccccagcacaagcggcgcgccag
caggagctcctcaaggccgcagcccccgccgagcccccgccgccccgcgaccctccccca
gacttcgaattcctcgctgacgcgccctctatctctgccctggagttggacatcgtcaag
ctcacggcgcagttcgtggcaagaaatggaaggcagttcttgacggacttgatgaagaag
gaggagaggaatcatcagtttgacttccttcgcccacagcattctttgttccagtacttt
accaggttattggagcaatacaccaaagtcctactcccaccaaaggagctaacatcaaaa
ctgggccaggagattcggaccggcgccctcgacgcggcccgcgggcgcgccgcctggctc
gcgcaccaggcgcgtcgcagagcccaggacgaggcccgagtggagcgcgagcggctcgcc
tacgcctgcgtcgactggcacgacttcgtagtcgtcgaaactgtggattatccggctgga
gaacccggggacttcccaccaccgaccacgccactcgaagtcggagcgagagtgttagcg
caggaacgtggtgtgactgctcctatcgatgatgatacagaaatgcagctcgagtccgaa
tcagaatcggaaagcgatgaggaactgtccactatggaagatcgcacgcagcagcagcgg
ccggatgatacccgcgtccaagacatggaagaggacagttcttcgagtgaagacgagcgt
gcgccggcgcctccgccgccgcgacgtcctgtccgcgaagaagcaccgctacctcctcgt
ccggatcgcgtcgttgtcaagcaatacgatccgaagcagccgcgcccggcccccgcaccg
ccgggcgacgaatggctagtctcccctatcaccggagagaagatcccagcgagcaaagtc
gccgatcacgtccgtatcggtctattggatcctcgctggctggaacaacgagatcgcgcg
gcggccgaacgctccgaccgcgacgaggccctcgccccaggcgccgcgatcgaagccagt
ctcaagcagctcgccgagcgccgtaccgatatcttcggtgtcggtgacgaggaaacggct
atcggtaaaaagatcggcgaagaagagaagcgacgcgacgatagagttacttgggacggg
catacttctagcgtcgaagcggctactcgcgccgctcgcgcgcacattacgcttgaagat
cagattcaacagatccataaagtcaaagggttgttgccggatgaggagaaggagaagatt
ggtccgaagcctgtgacggcgccgccgccgccgcgcatggcgcctccccgccccgcgccc
cctcccgccccgccgcgccccgtggcccccgcccccgtgctcctgcagccgctgccgtcg
ctgatggtgttgccgccgatggcgccgcggccgccgctgatcgcgacgccggtggcgggg
tactacgccccgccggtggaggaggaggagccggccgcgaagcgcccgaggacggaggac
acgctcgagccagagtctacgtggttagcgcgccatggaggcggtaacgtaggcgtaagc
gtgatcgttcccgcgcaaccagagcgcacagagtggcgcctggacgggcgcgcgctgccg
ctgtccatctcgctgaacgcgtccgtcgccgacctcaagaccatgctgcagcgctccaca
aacatgcctattgctaaacagaagcttcaatacgagggtctattcttcaaagacagcaac
acactggcatactacaacgtgccgcccggtgcggtcatccaactgcaagtgaaggagaga
ggaggacgcaagaagtaa
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