Cydia strobilella (spruce-seed moth): 134750159
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Entry
134750159 CDS
T10503
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134750159
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
90S particles
Helicases
134750159
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
nSTAND3
ResIII
HA2_N
AAA_19
Flavi_DEAD
Anticodon_2
ATPase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
134750159
NCBI-ProteinID:
XP_063541351
LinkDB
All DBs
Position
19:complement(9187237..9212575)
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AA seq
1189 aa
AA seq
DB search
MGKRVYNAKARQVVKTSIDNRKTNEIKLEFANSEYGSHDASNILALPAKKRQTKIINEKK
EKTRFLSKQQRKRLEKIVDKKKKKENRSALLESLAQVQASLEEVNQMTTISTVQTLGLRR
LTDLSTAAHVQEADASGSEKKFSSIAGAKKRLRLLKLDIEEKKKKAKYDPNIVGLVGSSS
EESSSESEDEPEIIEEQQNIQNGTLNVGNKDETVIINNEKANKIDAEIIQESTEKGQKVS
RNERNQEKTKKPVKVKEEVKKPVLEHPTIVVQVNRDPKIQVARLRLPILGEEQKVMELVN
ENEFLVVAGETGSGKTTQIPQFLYEAGYAEHKMIAVTEPRRVATVAMAARVGYELGLSSK
EVSYLMRFEGNVSKDTRIKFMTDGVLLKEIQSDFLLSKYSVVIIDEAHERSVYTDILLGL
LSRIVPLRRKRGSPLRLIVMSATLRVEDFTENTRLFKEPPPVIKIESRQFPVTVHFNKNT
YSDYLKEAFKKTVKIHTRLPEGGILIFVTGQQEVNYLVRKLRSSFPYRKDVDYTKLITKK
KVLSEEDAALDSEPEDIESDDDEVEKEMKRARKARKKAKKKSKELPKVNLDDYDMPEDDG
QADLVGSDEDSEGHLSDSDAEEDTLAPAIKSCRQPLWVLPLYSMLSSAKQARVFEPAPPG
ARICIVSTDVAETSLTIPAIKYIVDSGKKKMRVYDHSTGASAWRVVWTSQASASQRAGRA
GRTAPGHAYRLYSSAVFQHDCPDQHPPDLCRRPVDDLVLQMKCMGIDKVVNFPFPTAPDR
MQLRLAEKRLEVLGILEKVDTKRKDDEEVLKVTPLGKAVSAFPILPRYGKMLALSHQQNL
LPYTILLVSALTVPEVMSGKPDSWPATGNLQLLGDPGVLLRAVGAAEHAHSNGEEELFCA
KHGLREKAIKEIRKLRKQLTSEINLSVANVNASVEPKMAPPDDRQARLLRQLLLSGLGDQ
VGRKIGLDEVKEGEDKRKFKYAYHCGDLEEPVHLHSESILRRTIPEWVVYQELYETGGED
KRKMVMKNVTAIEPEWLPNYVPQLCNLGDPLTDPEPRFDDKSGRVKCHFKGTFGRAGWEL
PMVEIDFPDKIERYRWFARFLLEGTVVPKLKKYAGSLLSPPSTMVKSWAKLQPRTEIMLK
ALIMKRVGHRDALFNMWEEQSNYLLDEYLKWLPESAHNEVTLFWPPLKP
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgtgtttataacgctaaggcgcgccaagttgttaaaactagcatagataac
agaaaaaccaacgagataaaacttgaatttgcgaacagcgaatatggatcgcatgatgcg
agtaatatcctcgctctgcccgcaaagaagcgacagacaaaaattatcaatgaaaagaag
gagaaaacccgattcctttcaaaacagcagaggaaacggcttgaaaagattgttgacaaa
aaaaagaagaaggaaaaccgatcagcacttctagaatctctcgctcaagtccaagcgtcg
ctggaagaggtgaatcagatgacaactatttccaccgtacagactctgggtctacgcagg
cttacagatttaagtaccgctgcgcatgtgcaagaagctgatgctagcggaagcgagaag
aaatttagtagcattgcaggagcaaaaaagcgtttgcgccttctaaaacttgatattgaa
gagaaaaaaaagaaagctaaatatgatcccaatatagttggtcttgtaggatcgtcttct
gaggaatcaagttcagaatcagaagatgaaccagaaatcatagaagaacaacagaacatt
caaaatgggactttaaatgttggtaataaagatgaaactgtaataatcaataatgaaaaa
gcaaataaaattgatgctgaaattatccaagaatctacagaaaaaggacaaaaagtgtca
agaaatgagagaaatcaagaaaaaacaaagaaaccagtgaaagttaaagaagaagtgaag
aaaccagtgttagaacatcccacaattgttgttcaagttaatagagaccctaagattcag
gtagcaaggctcagactcccgattttgggcgaagagcaaaaagtcatggaattagtcaat
gagaatgaatttttggtagtcgctggtgaaactggaagcggtaaaaccactcaaataccc
cagtttctgtatgaagcggggtacgctgagcacaaaatgatagcggtcacagagccgaga
agagtggcgacggttgccatggcagccagagttggttacgagctgggtctgagcagcaag
gaggtgtcgtatctgatgaggtttgagggcaacgtcagtaaggatactaggatcaaattt
atgactgatggtgttctcctgaaagaaatccaatcagatttcctcttaagcaaatattct
gtcgtaataatcgacgaagctcacgaacgcagcgtgtacacggacatactactgggacta
ctttcaaggatcgttccgttgaggagaaagaggggtagccccctgaggctcattgtgatg
tctgctacgctacgggtcgaggatttcacggagaatactaggctttttaaggaaccaccg
ccggtaattaagattgaatctcgacagtttccggtgacagtgcatttcaataaaaacaca
tacagtgattacttaaaagaagcgtttaaaaagactgtcaaaatacacaccaggcttcct
gaaggtggcattctgattttcgtcactggacaacaagaggtaaactacctggtccggaaa
ctccgatcctcgtttccttaccgtaaggacgtggactacaccaagctaatcactaaaaag
aaggttttgagcgaagaagacgcggctttggactctgagcctgaggacatcgaatctgat
gatgatgaggttgaaaaagaaatgaaacgagctcgcaaagcgcgaaaaaaagcaaagaag
aagtctaaagagctgcctaaggtaaacttggacgattatgacatgcccgaggacgatgga
caggcggacttggttggcagcgacgaagatagcgaggggcatttgagcgattcagatgcg
gaggaagacaccctagcaccagcaataaaatcctgccgccaacctctatgggtgctaccc
ctatactccatgctatcttcagcgaagcaagcgagagtattcgagccagcgccccctggt
gctcgaatatgtattgttagtacggacgttgctgaaacctcgctcactataccggcgatt
aaatatattgttgatagtgggaagaaaaaaatgcgtgtctacgaccactcgacaggcgcc
agcgcctggcgcgtagtgtggacatcgcaggcctccgcctcgcagcgcgccggccgcgcc
ggccgcacggcgcccggacacgcctacaggctctacagctccgcggtcttccagcacgac
tgtccggaccagcacccgccggacctgtgccgcaggccggtcgacgatctggtgctgcag
atgaagtgcatgggcattgacaaggtggtgaatttcccgttcccgaccgcaccggatcgg
atgcagctccggttggcggagaagcgactggaggtgctgggtattctggagaaggttgat
acaaagaggaaagatgacgaggaagttctaaaagtgacgcctcttggtaaggcggtgtca
gcgttcccgatacttccccgctacggaaaaatgctggcgttaagccaccaacagaatctc
ctgccgtacactattttgttagtgtccgcccttactgtgcctgaggtgatgtcaggcaaa
ccggacagttggccggcgactggtaacttacaactactcggtgacccgggcgtgctgctg
cgagctgtgggcgcagcagaacacgcccactccaatggcgaagaggaacttttctgtgcc
aaacacggattaagagagaaggccatcaaagaaatccgcaaacttcgaaaacagctaaca
tcagagatcaatctaagtgtggctaacgtaaacgcatccgtagagccaaagatggcgcca
ccagacgatagacaggcgcgtttattacgacaactgttacttagtgggcttggagaccaa
gtaggaagaaagattggactcgatgaggtgaaggaaggcgaagacaagcgaaaattcaaa
tacgcgtaccactgcggtgacctagaagagcctgtccacctccattccgaatccatactt
cgccgcacgatccccgaatgggtggtgtatcaggagctatacgaaactgggggcgaggat
aagaggaaaatggtgatgaagaacgttacggctatagagccggagtggctcccgaactat
gtgccgcagctgtgtaaccttggcgatcctctcacggacccggagccaaggttcgatgat
aagtccggccgagtgaagtgccacttcaaaggcaccttcggcagggctggctgggagctg
cccatggtcgaaatagactttccggacaaaatcgagagatacaggtggttcgcgcgtttt
ctcctagagggcaccgtagtacccaagctcaagaaatacgcgggctctttactctcccct
ccctccactatggtaaagagctgggccaagctgcagccgcgtacggagataatgctgaag
gcgctcattatgaagagagtgggacacagagacgctttgttcaatatgtgggaagagcag
agcaattatttgcttgacgagtatttaaaatggctgccagaatcagcgcataacgaggtg
acattattttggccgccgctaaagccgtga
DBGET
integrated database retrieval system
