Cydia strobilella (spruce-seed moth): 134750639
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Entry
134750639 CDS
T10503
Name
(RefSeq) RING finger protein 17-like
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134750639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-B_box
SMN_Tudor
ANCHR-like_BBOX
zf-RING_UBOX
zf-RING_5
zf-C3HC4
TMPIT
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
134750639
NCBI-ProteinID:
XP_063541932
LinkDB
All DBs
Position
2:complement(8506983..8537959)
Genome browser
AA seq
1729 aa
AA seq
DB search
MDVNIKKSCPNCSQLYNVTCIGSHLKGNIPLFLTCGHTMCETCIQSIIKFAEPIECKVCR
QTSDMKISDPVKLVKNKRDFYKMFPVNMAMFGEIAMELMMEADCKNDLSENYFVDLKDII
QNTDYTTGKCIECHQFTTKMCQQCQTILCENCFNKTHKNFVVFKTHVLQNIEPFIRANQC
KIHSDKTLDYYCKDCQKSICMDCLMVGGEKSCKNHNVASMQEVNERLLEDLNGVFPKVDE
TFRRLTKTAVDVGHLLHNIENETGSASELTQMIATVEQHFSKLNSIVQKHKTEVTEIITK
LKCAEKESLYKVKEDITKTIKKAKEVINTMTLSLDKKKMKQLNLCVLLEDAKQIAESPWY
LNKSNLKNESLNVAVNDDVCNLISDYIHLEGNVKSGYSLISTAEFEEGTEIPPAPVAPVY
PPELPKDVRQKKAPKQKPEKVNPPPKPMPFYDSSSMFRIKGGSTSSINSVGTAGSDSSHV
SGATRFSEALSRPVVQPVSPFTESRVPKQLHEGSQEMIYITHIVDPHNFYVQRACHQTVV
KEMLREFKNSVSSPKPSIAHIKEGKFCLAFNETDNMWQRCRIVSIDRKNPDKPICTVFCI
DFGSTEVVPAHKLRLLQPGRVQTPPPLAINCCLANCEPKCGTWTSEDSYLIQNIINNKQA
VIYIRNMQSTSNFTMRLLCDVTTFEEGVNLAHALAFHERAKLINPRLHYPKISGLKEKPK
LFMVNNNLKLKSKEEVYITHIYSPDKFYVRERHLQSAFEKLNEDLEQEYSLAVNTESVHL
PEIGVVYVVNTELGRRGQAEAAEAADAAAWARALVLELPGRSRVRVLLVDSGAVELVHWR
ALRPVRPHFTQLRALATECHLAGVTPLNKKWSAASVALLQRFEERMLELHVEDNRNRGSL
GVTLYDKTEEDVVCVNNEMIKYKFAITFGLFRFNLSDSESQGATHKAPQDETKKSEAKRN
AKKIKILSHDDDDTKVDEKNLEAKDKGPLRLEAKLLQYQSPSLLYVSLVHQQNTFNLLFE
KIQTEYSKANSENDKKDWKEGDRCCAFCEESKTWRRAVIVELVDNKAKLFYSDFALVEAV
PLDNLRVLIPDFESLGDAAIKCHLSGVMPAVGTEWPSLTKEYLKELLEVYKRVFITKIGN
FKDRSMPVELWVYHTTQGGALEPDMSEWRCLNLKIIEQGLAIPDKSETAAEESNVKSDDE
EMLSFGNLTGSVREWLQLEPLPTKPLVQSDVTGASTPEVDDVNAHIDQVQAGSSNTEFIS
DWLPAEPLPTNEFTGVPTYIDNDGVVFLHQLAQEETLELIRKALEVRFKKPDPKAKYAKW
TVGEPCVAMYFLDNRFYRGRVLEVNKDTSSCLVQYVDYGNEEICSFVNMRKSIALHQIPI
QAHKCILARIRPIGNQWDRTTLDYIHKSVVEKHCLVKLSGEHVGDLLPIELKYDKLWIND
HLADFEMAEYTDGSKTVVKKFAPNTNIKSQENEDLKSDSGPDYIVDEDADSAELLSSHDC
SFDAKSFEAADWNLLMEQEGQSKHEKMLAYTKHDKEEFLSNIILINDLDTLELAFVHNDE
DNLLYDEMFECLQREAANLPLLNGIYEDKPCIGLFNDETGQPGWYRASIQRYSKSKGLVK
VRYVDYGNTDVVSTSNVKEMNEKWLKLPPASLQANLYEVKVNPHVDVNIVSTKFIETFLD
KGPFQTKIITYENSKPQVELRNEDGKLVYSQLISSGYLIENDLCINDKF
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaatattaaaaagtcttgtccgaactgcagtcaactttataatgtaacatgt
attgggtcacatctaaaagggaacattcccttgttcttgacatgcggccataccatgtgt
gagacatgcattcaaagcatcataaaatttgccgaacctattgagtgcaaggtgtgccgc
caaacctcagacatgaagataagtgacccagtcaaactggtcaaaaacaaaagggacttt
tacaaaatgtttcctgtcaacatggccatgtttggagaaatcgccatggaactcatgatg
gaagccgattgtaaaaatgatctcagtgaaaattattttgtggatctcaaggatattata
cagaatactgactacacaacaggaaaatgcattgagtgccaccaatttaccactaaaatg
tgccaacagtgccaaacaatattatgtgaaaactgcttcaacaagacacacaaaaatttt
gtagtcttcaaaacacatgttcttcaaaatatagaacccttcatccgtgccaaccagtgc
aaaattcacagtgacaagacacttgactattactgtaaggactgtcagaagtctatttgt
atggactgcctcatggtgggaggtgaaaagtcttgtaagaatcacaatgtagcatccatg
caagaagtgaatgaaaggcttctggaagacctaaatggggtatttccaaaagtagacgaa
acctttaggagacttaccaaaacagcagtggatgtagggcacctgttacataacatagag
aatgagactggatcggcttcagaactgacacaaatgattgccacggttgagcaacacttt
tcaaaacttaattccatagtacaaaaacataagactgaagttactgaaattattactaag
ttgaaatgtgctgaaaaagaatctctgtataaggtaaaggaagatatcacaaaaacaatc
aaaaaagctaaagaagtgattaataccatgactctctcactggataaaaagaaaatgaaa
cagttgaatctgtgcgttttactcgaagatgccaagcagatagctgaatcaccatggtat
ttgaacaaaagcaacctcaagaatgaaagtttgaatgtggctgtcaatgacgatgtttgt
aacctaattagcgattacatacatttggaagggaacgttaaatcgggctacagtttgatc
tcaacagcggaatttgaagagggaactgagatacccccagcaccggtcgctccggtatat
ccgcctgaactccctaaagacgtgcgtcaaaagaaagcccctaagcagaaaccggaaaag
gttaatccgccaccaaagccgatgcctttctatgactcatcctcaatgttccgtatcaag
ggcggctcgacgtcgtcgatcaactccgttgggacggcagggagcgactcatcacacgtc
agcggcgcgactagattcagtgaagctttgagtaggcctgtggtacaaccagtgtccccg
tttacagaaagcagagttccaaaacaactccacgaaggttctcaggagatgatttacatc
acacatattgtggatcctcataatttttatgtccaacgagcttgccaccaaaccgtggtc
aaagaaatgctgcgagagttcaaaaattctgtttcctcgcctaaaccatccatagcgcat
attaaagaaggaaagttttgcctggcgttcaacgaaaccgacaacatgtggcagcgttgc
cgcatcgtcagcatcgaccgcaagaatccggacaagccgatatgtactgtgttctgtatc
gactttggaagcaccgaagttgttcctgcccataagcttcgtctgctgcaaccaggcaga
gtccagacaccgccaccgttagccatcaattgctgcttggctaactgtgagcccaagtgt
ggcacttggaccagtgaagactcttacctcattcagaatattataaataacaaacaagcg
gtgatatacatacgcaacatgcagtcgacgtcgaactttaccatgcggctgctgtgcgac
gtgaccacgttcgaggaaggcgtgaatctggcgcacgcgctcgccttccacgagcgcgcc
aaactcatcaaccccaggttacactacccaaaaatatccggattgaaagaaaaaccaaaa
ttgttcatggtgaacaataatttaaagctgaaatcaaaagaagaagtttacataacgcac
atctatagccccgacaagttttatgtgcgagagcgccacttgcaaagcgctttcgaaaaa
ctgaacgaggatttggagcaagagtacagtttggctgttaatactgagagcgtgcatctc
ccggaaatcggcgtggtatacgtggtgaacacggagttgggacggcgcggacaggcggag
gcggcggaggcggcggacgcggcggcgtgggcgcgggcgctggtgctggagctgccgggg
cgctcgcgcgtgcgcgtgctgctggtggactcgggcgccgtggagctcgtgcactggcgc
gcgctgcgccccgtgcgcccgcacttcacgcagctgcgcgcgctggcgacggaatgtcac
ctcgccggagtgacacccttgaacaagaaatggagcgcggcctccgtggcgctcctgcaa
cggttcgaggagcgcatgttggagctgcacgtggaggacaaccgcaaccgcggctcgctc
ggcgtcacgctctacgacaagaccgaggaggacgtcgtctgcgtcaacaacgagatgatc
aaatacaagttcgccatcacctttggtctgtttagattcaacttgagcgacagcgaaagt
caaggtgcaacacacaaggctccgcaagacgaaacaaagaaatcagaagctaagcgtaat
gctaaaaaaattaaaatactaagccacgatgatgatgacaccaaagtagatgaaaagaat
ttggaagctaaggataaaggtccactcaggctcgaagccaagttgctgcagtaccagtca
ccttctctactctacgtgtcgctagttcaccagcagaacactttcaatctcttatttgag
aaaatacaaacagaatactcaaaggcaaattctgaaaatgacaaaaaggattggaaggaa
ggggacagatgttgcgcattctgtgaggaatccaaaacgtggcgacgagctgtcatcgta
gaattagtagacaacaaagcaaagttgttctattctgatttcgcactagttgaggcagtt
cctctggataatttaagagtgttgatcccagacttcgaatccttgggagacgccgcaatc
aaatgccatttgtccggagtgatgccggcagtcggcaccgaatggccttcactcactaaa
gagtatctcaaagaactactggaagtttacaaaagggtgtttataaccaaaataggcaac
ttcaaggacaggagtatgcctgtggagttatgggtgtaccacaccacccagggcggtgct
ctggagcccgacatgtcggagtggcgctgtctaaatctgaaaatcattgaacagggtcta
gcaataccagacaaatctgagactgccgcagaggaatcaaacgttaagagcgacgacgag
gaaatgctgtcgttcgggaacttgacgggttccgtgcgcgagtggctgcagctggagccg
ctgccgaccaaaccgctggtccagtcggacgtcaccggcgcctccacccccgaggtcgac
gacgtcaacgctcacatcgaccaggtccaggccggctcctcaaatactgagttcatatct
gattggctgcctgccgagcctttgccgaccaacgagttcacaggggtgccgacgtacatc
gacaatgatggtgtagtctttctacatcagctggcgcaggaagaaacgctggagcttatc
cgcaaggcgctcgaggtccgcttcaagaagcccgaccctaaggccaagtacgcgaagtgg
accgtgggcgagccgtgcgtcgcgatgtacttcctggacaaccgcttctacagggggcga
gtgttggaagtcaacaaagacacgtcctcctgtttagtccagtacgtcgattacggcaat
gaagaaatctgctcgtttgtcaacatgaggaagagcattgcccttcatcagatacccata
caggcccacaagtgcattctggctcgaattcgcccaataggcaatcagtgggatagaaca
acgttggattatatacacaaatcagtcgtagagaaacactgtttggtcaaattatctgga
gaacatgtcggcgatctcttgccaatagagctgaaatatgacaaattgtggataaacgac
cacctagccgacttcgaaatggcagagtatactgacggatctaaaaccgttgttaagaaa
ttcgcgccaaacacaaatataaagtcacaagaaaacgaagacctgaaatctgactcgggg
ccagattatatcgtcgatgaagatgccgatagcgcggagctcctgtcgtcacacgattgt
tccttcgacgcaaagtctttcgaggctgcagattggaatttgctcatggaacaagaaggc
cagtcaaaacacgaaaaaatgctggcttatacaaaacatgataaagaagaattcctatct
aatattatacttattaacgatttagatactctggaattagcttttgttcataacgacgaa
gataatttgttatatgatgagatgttcgaatgtttgcaacgtgaagccgccaatttgccg
ctgcttaatggaatatatgaagataaaccatgtattggtctgtttaacgacgaaactggc
caaccagggtggtacagagcatctatacaacgatacagcaaatcaaaaggactcgttaaa
gtacgctatgttgattatggcaacactgacgtcgtttctacatcgaatgtgaaagaaatg
aatgaaaaatggttgaaattgccacctgccagcctacaggctaatttatacgaagtcaaa
gtgaatccccacgtagacgtgaatattgtgtcgactaaatttatagaaacattcctggac
aaggggccattccagactaaaatcataacgtatgaaaattctaaaccccaagtagaacta
agaaacgaagatggtaaacttgtttacagccagctcataagcagcggatatttgattgag
aacgatttgtgtatcaatgacaaattttag
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integrated database retrieval system
