Entry |
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Name |
(RefSeq) nucleoporin NDC1
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KO |
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Organism |
cstb Cydia strobilella (spruce-seed moth)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cstb00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134750929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cstb03019]
134750929
Messenger RNA biogenesis [BR:cstb03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134750929
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:9835726..9837882
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AA seq |
564 aa
MESKSEIFSKRLVTAVLWNLGLQIFLAVVLVFFIQVDILHPLSWFASTFNDIFGWKMSLN
IVLLGLVSFFQAYIYGCYYMVPLPKYFTRFSMFLNLFTTQNVIFSILYALSGYFTMSLYS
SLAKSNFNVLKKKCEHYDGQCLMEQSLFLQFGGMWMGLYYFLNAHIFSTPMLMFPNVYQN
KFQQLKQAIGRILSMGFKNSVMPVVYFCLFYNLWGHKPRSVVSDVYSLFLEDPPLDNILN
LIRSGIWIGLWFYTSLFFISVYTMRTIFNIVLTEPMKFQIESETGPTLYAALAQRTQFTG
YLGAQDLKVVSQMDSTRRLQIFTLSQPGGHPRNWNHILESCLNIINSYTKELENINSDVK
PIELGISQKNMNITPPSGQIYSGNLRNLAQTPDMSKDYNYNLNKNKVNEMTFAKVLKEEF
NGLLQRICQKPGISYFFGELTDTKLKFVLMQAQPVMWTCEGLAFIVAASLKEDKYGVVQN
DLPIVISALINLKSNLDKLTKLGLVPKKHILNDVFAIKMKSALMTSLKRSIYKIVITFSK
YFHEIPMDPDVQIAVQPFLLCKEP |
NT seq |
1695 nt +upstreamnt +downstreamnt
atggagtcgaaaagtgaaatattttccaaaagactggtaacagcagtgctatggaatctc
ggactccaaatatttctggctgttgtgttggtgttttttattcaggtggatattctacat
ccactatcatggttcgcatcaacttttaatgacatatttggatggaaaatgagcctgaat
attgtgctgctgggattggtttcgttttttcaagcatatatttatggctgctactacatg
gttcctttgcctaagtactttaccaggttttcaatgtttttgaatttattcacaacccaa
aatgtcatattcagcattttgtatgcattaagtggttactttacaatgagcctgtattca
tctcttgctaaaagcaactttaatgttctgaaaaagaaatgtgaacattatgatggccaa
tgtctcatggagcaaagtctgtttttacagtttggcgggatgtggatgggtctgtattat
ttcttaaatgcacacattttcagtacacccatgctaatgtttccaaatgtgtatcaaaat
aaattccaacagttaaaacaagctattggcaggatattgtctatgggttttaagaattct
gtaatgcctgttgtgtacttctgcttgttttataacttgtggggccacaagccccggagt
gttgtttctgatgtctacagcctgttcttggaagatcctccattggataatatattaaat
ttgataagatctggcatttggattggactctggttctacaccagtttgtttttcatttcg
gtgtataccatgagaaccatctttaacatagtgttgacagaaccaatgaagtttcaaatt
gaatcagaaactggtccgactctgtatgctgccttagctcagagaacacaatttactgga
tatttaggggctcaagacttgaaagtagtgtctcagatggactctacaagaagattgcag
atctttacactgtcacagcccggaggccatccaagaaattggaatcatatcttagaatct
tgtttaaacataattaatagctatacaaaggaattggaaaatattaatagtgatgtgaaa
ccaattgagcttggcatctcacaaaagaacatgaacatcacacccccttcaggccaaatt
tattctggaaatttaagaaacttggcacaaactcctgatatgtcaaaagattataattat
aatctaaataaaaataaagttaatgagatgacatttgcaaaagttcttaaagaagaattc
aatggtttactacagaggatatgccagaagcccggaatcagttacttctttggggagctg
acagacaccaaactcaaattcgtgctaatgcaagctcagccagtgatgtggacatgcgag
gggctggcattcattgtggccgcatccttaaaggaagataagtatggtgtggtacagaat
gacttgccaattgtgatttcagctttaataaatctcaaaagcaatttagacaagttaact
aagctgggactggtgccaaagaaacacatcctgaatgatgtgtttgctatcaaaatgaag
tctgccctcatgacttcacttaaaaggagtatatataaaatagttatcactttttctaag
tatttccatgaaatacctatggatcctgatgtacaaattgctgttcaaccattcttattg
tgtaaagaaccctga |