Cydia strobilella (spruce-seed moth): 134751133
Help
Entry
134751133 CDS
T10503
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cstb03041
]
134751133
03009 Ribosome biogenesis [BR:
cstb03009
]
134751133
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134751133
Spliceosome [BR:
cstb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134751133
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
Pre-60S particles
Helicases
134751133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134751133
NCBI-ProteinID:
XP_063542563
LinkDB
All DBs
Position
21:8394015..8410848
Genome browser
AA seq
796 aa
AA seq
DB search
MEVAGFPGFIKTINDGEEVEDFSEESDVEVEYQPSKQKVKKKADFNPKFQFVSSVEEYNK
NTWDDLQKYVRRNVKRTIDEKIERRRAQAKVTGSAGDIDTDEDENKDSDVDELEISDDEL
KKDEIKTKEKKLTKKQKLKQELNDDGEGAQVEYDSDFFEEPPPYDEQASFYMMNLSRPLL
KAIGILNYVHPTPIQAATIPVALLGKDICACAATGTGKTAAYMLPILERLLYKTVGGRVT
RVLVLVPTRELGAQVHTVTRQLSQFTTVTVGLSVGGLDVKYQESVLRRNPDVVIATPGRL
IDHIRNTPSFSLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVK
DLAAVSLQKPVKLFLDSNKAVAFNLRQEFVRIRAGREADREALLCALVCRTFRDRAVVFV
QTKKQAHRLHVALGLLGVKVAELHGALNQPQRLDSLKRFKDELVDVLVATDVAARGLDIP
GVKTVLNFTLPATLEHYIHRVGRTARAGRAGVSVSLAGEAERQLVKLIVRRAKRPVKSRQ
VPPEIVAKYRERLTRLEPEIAAILDEEYAERQLNKMEKQTAKLEGSLKKEKQEPTRQHEW
FQTPKEKREEKERLALTAHAGKDKQKTKAKKRKRDSDDESDYESGRKRGRRDAGGKGKDK
ERGKPRPKDSAEERVQREMEKVALLQSRMAKRKKKQNRIRTVEDNDDRPRVQKQKTKRKQ
SNFASDLTDTSRAATKRLRYDANRVQKGKPVGPKGKGKPMGKGKPAKGGAKGRGNPQKGK
AFGKPQAPKQGGRRKK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgccggatttccagggtttataaaaactattaatgatggtgaagaagtggag
gatttctcggaggaatccgatgtggaagtagagtatcaaccctccaagcaaaaagtaaag
aagaaagccgatttcaatccgaagtttcagtttgtttcttctgtagaagaatataacaag
aatacttgggacgacttacaaaagtatgttcgccgaaatgtgaagcgcaccatagatgag
aagatagaaaggcggcgagcgcaggccaaggtgactggatcagcgggtgacattgacacg
gatgaggatgaaaacaaagatagtgatgtagatgaactagaaatatcagatgatgaactc
aagaaggatgagatcaagaccaaggaaaagaaactcactaaaaagcagaagctaaaacag
gaactcaatgatgatggagaaggtgctcaggtcgaatatgactctgatttctttgaagaa
ccaccgccatatgatgagcaggcttcgttctacatgatgaacctctctcggccactgctg
aaagccataggaatactgaattatgtccacccgacacccatccaggcagctaccatacca
gtggctttactagggaaggacatatgcgcttgcgctgcgacaggcacgggcaaaacggcc
gcgtacatgctgcccatactggagcggctgctatacaagacagtcggcggacgagtcact
agagtgctggtacttgttcctaccagagaattaggcgctcaggttcacaccgtaacccgt
cagctctctcagttcaccactgtgacggtgggcctgtctgtgggtggtctcgacgtgaaa
taccaagaaagcgtgctgcgaagaaaccctgacgtggtgatagcgacgccgggccgactt
atagaccatattaggaacacaccctctttcagtctgcactctattgaagtactagtgctt
gatgaagccgacaggatgttagacgaatacttcgcggagcagatgaaggagatcatccgg
cagtgctcccccaagcgtcagaccatgctgttctcggccaccatgagcgaggaggtcaag
gaccttgctgcagtctctctgcaaaaaccggtcaaattgttcctggactctaacaaggct
gttgcttttaatctacgtcaggagttcgtcaggattcgcgcgggtcgagaggcagaccgc
gaagcgctgctgtgcgcgctggtgtgtcgcaccttccgcgaccgtgccgtcgtgttcgtg
cagacgaagaaacaggcgcaccggctgcacgtcgccctaggcttgctcggtgtcaaggtg
gccgagctccacggggccctaaaccagcctcaacgtctcgactcccttaaacgcttcaaa
gacgagctggttgatgtgctagttgctaccgacgttgcagcgagagggttagatataccc
ggcgtgaagacagtactcaactttacactgccagcgacattagaacactatatacacagg
gtggggcgaacagctcgcgcgggccgcgccggagtgtcggtgtctctggcaggcgaggcg
gagcgccagctcgtcaagctcatagtgaggcgcgctaaacgacccgtcaagtcccgccag
gtcccgcccgagatcgtcgccaagtacagggagagattgacgcggttggagccagagatc
gccgccattttggacgaagaatacgccgagcgccagctgaacaagatggagaagcagaca
gccaagctcgaggggtccttgaaaaaggagaaacaggagccgacacggcaacacgagtgg
ttccagacccccaaggagaagagagaggagaaggagcggctggcactcacggctcatgct
gggaaagataaacaaaagaccaaagcgaagaaacgcaagcgtgactcggacgacgagtca
gattacgagtcaggcaggaagcgggggaggagggacgcgggggggaaggggaaagataag
gagcggggcaaaccgaggcctaaggactcggccgaggagcgagtgcagagagagatggag
aaggtggcgctcctacagtcccgcatggccaaacgcaagaagaagcagaaccgcatccgc
acggtcgaagacaacgatgaccgcccccgtgtccagaaacagaaaaccaaacgcaagcaa
tccaacttcgccagcgacttaactgacacctccagagcggcaaccaaacgcttacgctac
gacgccaatagagtccagaaaggcaagccggtgggccctaaaggcaaaggcaagcctatg
ggtaaaggcaagccggctaaaggaggcgccaagggtagaggcaatccgcagaagggcaag
gcgttcggaaaacctcaggcgccgaagcagggtggacgtaggaaaaaataa
DBGET
integrated database retrieval system
