Cydia strobilella (spruce-seed moth): 134751237
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Entry
134751237 CDS
T10503
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cstb03036
]
134751237
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134751237
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
134751237
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
134751237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_RRP12_N
HEAT_EF3_N
Hisat_C
Motif
Other DBs
NCBI-GeneID:
134751237
NCBI-ProteinID:
XP_063542691
LinkDB
All DBs
Position
21:1037855..1068679
Genome browser
AA seq
1371 aa
AA seq
DB search
MAEIVYPQGCRPITDDLGPDELVRRLKALAHTLQGLGQDEGMYQQYIPLAIHLADEFFLA
NPSRDVQLLIACCIADVLRVYAPEAPYKDQEQVKTIFLFLINQLQGLRDPKDPAFKRYFY
LLENLAYVKSFNMCFELEDCQEIFCALFSLMFKIVNTEHSSKVKSFMLDVLCPLITESDV
VSNELLNVILMNLVEPNKRERKHAYALAKELISKTSETLEPYIQAFFNHVLILGKEEKTL
LIFSKVYELIYELNQCCPSILIAVLPQLECKLKSAQFQERLSAVALLARMFSEPGSGLAK
QYPALWRAFLGRFNDIAVPIRIKCVQYCMHFLVHHPDLRKDITETLKMRQHDAHEQVRYE
VVMAIIATAQRDFQAVAESEDLLHFVRERTLDKKFKIRKEAMSGLAMIYRKFLTEESVPP
ATEKAVQWIKDKILHGYYMTALEDRLLVERLLNTSLVPYWTLQRNKYTIRMKKLYYLMSN
VDANATKAFIELQKHQLAVRRTVAEWVELHRKPPTPAVQKELIAKVLHISSKFLPESVKA
QEFLNKFSAHMKQAPELLQGMEMILNPNVSCEVCFRTTSNVLKKLGQPVMTNLYYNTVKM
LLERVSSVMIDHEALLILVGYVEGACRGSDDSIAEECGTTQKVAAERGLKLLVMLSFVFP
SHFLHSDVLERLTALLEHEDESVAPHILAALTFLGKYRPLSEACPSLFPRLTSLCKAYAE
VGTPKQAKNAVRCLFVNVPEQRSAIFTEILETLKGTLTPHSEHYRTAIVTLGHIAHNLPE
TFPLHIKNIVSRKIVKELLLVVRLGGGGPRAPDDEWCACAEEELPEETRSRCKLEGLKCI
EGGGGPRAPDDEWCACAEEELPEETRSRCKLEGLKCIEGGGGPRAPDDEWCACTEEELPE
ETRSRCKLEGLKCIEGGGGPRAPDDEWCACTEEELPEETRSRCKLEGLKCIEGGGGPRAP
DDEWCACTEEELPEETRSRCKLEGLKCIEGGGGPRAPDDEWCACTEEELPEETRSRCKLE
GLKCIEGGGGPRAPDDEWCACTEEELPEETRSRCKLEGLKCIEGGGGPRAPDDEWCACTE
EELPEETRSRCKLEGLKCIEGGGGPRAPDDEWCACTEEELPEETRSRCKLEGLKCIEGGG
GPRAPDEATTSGWRRASRARRGDDEWCACAEEELPEETRSRCKLEGLKCIEGGGGPRAPD
DEWCACAEEELPEETRSRCKLEGLKCIEGGGGPRAPDDEWCACAEEELPEETRSRCKLEG
LKCIEGGGGPRAPDDEWCACAEEELPEETRSRCKLEGLKCIEGGGGPRAPDDEWCACAEE
ELPEETRSRCKLEGLKCIEGGGGPREMTLPYFFPQSQQTRSTSSHNADLML
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatagtgtacccgcaaggctgcaggcctatcaccgatgacctaggacccgat
gagctagtgcggagacttaaggcattggcgcacactctccaagggttaggccaggatgag
ggcatgtaccagcaatacatccctctggcaatccacctcgccgacgagttcttcctcgcc
aacccctctcgcgacgttcagcttctgatagcatgttgtatcgcggatgtactgcgtgtg
tacgctcctgaagcgccgtataaagaccaggaacaggtgaagacaatattcctgttccta
atcaaccagctgcaaggcctccgggacccaaaggacccggcattcaaacgctacttctac
ctgcttgagaaccttgcctatgtcaagtcgtttaacatgtgctttgagttggaagactgc
caggagatcttctgcgctctgttctcgctcatgttcaagattgtcaacacggagcactcg
tccaaagtgaaatccttcatgctggacgtcctgtgcccgctgatcacagagtcggacgtg
gtctccaacgagctgctgaacgtgatcctcatgaacctggtggagccgaacaagcgtgag
agaaagcacgcgtacgcgctcgccaaggagctgatcagcaagacgagcgaaactttagaa
ccttatatacaggcgttcttcaaccacgtcctaatcctcggaaaagaagaaaaaaccctc
ctaatcttctctaaagtatacgagcttatctacgaactgaaccaatgctgcccctccatc
ctcatcgccgtgctaccccagctcgaatgcaagctcaaatccgcgcagttccaggagaga
ctcagcgctgtcgccctacttgctagaatgttctccgaacccggatcgggacttgccaag
cagtacccagccctatggcgagctttcctaggacgctttaatgatatagctgtcccgatt
cgaatcaaatgtgtccagtattgcatgcacttcttagtgcaccacccagacttgagaaaa
gatataacagagacattgaaaatgcgacagcatgatgctcatgaacaggttaggtatgaa
gtcgttatggctataattgcaacagcacagagagatttccaagcggtagccgaatcagaa
gacctgctccattttgtaagagaaagaactctggataaaaaattcaaaatccgtaaagaa
gctatgtcaggtttagctatgatttacagaaaattcttgactgaagaaagcgtgccgccg
gctacagagaaggcggtacaatggattaaagataaaatcctccacggatattatatgacc
gctctagaagacagattgcttgttgaaagactgttaaacacttctctcgttccttactgg
actctgcaaaggaacaaatatacgattagaatgaagaagttatactatctaatgtctaat
gtcgacgctaacgcaactaaagcgtttatagaacttcaaaagcatcagttagcggtccgt
cgtacggtcgccgaatgggtagagctacacagaaaaccaccgacaccagcggtgcaaaag
gaattgattgctaaagtcttacacataagctccaagttcctgccggagtcggtgaaggca
caggagttcttaaataagttctcggctcatatgaaacaggcgcccgagctgctgcaggga
atggagatgatactgaatcctaatgttagctgcgaagtgtgctttcgtaccacgtcgaac
gtgctaaagaaactcggccagcccgtgatgacaaacctctactacaacacagtaaagatg
ctgctggaacgcgtcagctccgtaatgatcgaccacgaggctctgctcatcctcgtcggt
tatgtagagggcgcttgtaggggctctgacgactccatcgctgaggagtgcggcacaaca
caaaaagtggcagcagagcgcggcctgaagctcctagtgatgctctccttcgtgtttccg
tcgcacttcttacactcagacgtattggaacgactcacagctcttctggaacatgaggat
gaatctgtggcgccgcatattctagccgcgctcacgttccttgggaaatatcgcccgctg
agcgaggcgtgtccatctctgttcccgcgactgacctcgctgtgcaaggcgtacgccgaa
gtcggcacgcccaaacaggccaagaatgctgtcagatgcctattcgtgaacgtgccggag
cagcgctctgccatctttaccgaaatcctggagacgctgaaaggcacgctaactccacat
tctgagcattaccgcacagccatagtgacgctcggacacatcgcccacaacctgccggag
accttccctctgcacatcaagaacatcgtctccagaaagatcgtgaaggagcttctactc
gtagtccgcttgggtggcggcgggcctcgcgcgcccgacgacgagtggtgcgcgtgcgcc
gaggaagagctgccggaggagacccgctcccgctgcaagctcgaggggctcaagtgtatc
gagggtggcggcgggcctcgcgcgcccgacgacgagtggtgcgcgtgcgccgaggaagag
ctgccggaggagacccgctcccgctgcaagctcgaggggctcaagtgtatcgagggtggc
ggcgggcctcgcgcgcccgacgacgagtggtgcgcgtgcaccgaggaagagctgccggag
gagacccgctcccgctgcaagctcgaggggctcaagtgtatcgagggtggcggcgggcct
cgcgcgcccgacgacgagtggtgcgcgtgcaccgaggaagagctgccggaggagacccgc
tcccgctgcaagctcgaggggctcaagtgtatcgagggtggcggcgggcctcgcgcgccc
gacgacgagtggtgcgcgtgcaccgaggaagagctgccggaggagacccgctcccgctgc
aagctcgaggggctcaagtgtatcgagggtggcggcgggcctcgcgcgcccgacgacgag
tggtgcgcgtgcaccgaggaagagctgccggaggagacccgctcccgctgcaagctcgag
gggctcaagtgtatcgagggtggcggcgggcctcgcgcgcccgacgacgagtggtgcgcg
tgcaccgaggaagagctgccggaggagacccgctcccgctgcaagctcgaggggctcaag
tgtatcgagggtggcggcgggcctcgcgcgcccgacgacgagtggtgcgcgtgcaccgag
gaagagctgccggaggagacccgctcccgctgcaagctcgaggggctcaagtgtatcgag
ggtggcggcgggcctcgcgcgcccgacgacgagtggtgcgcgtgcaccgaggaagagctg
ccggaggagacccgctcccgctgcaagctcgaggggctcaagtgtatcgagggtggcggc
gggcctcgcgcgcccgacgaggcgacgacgagtgggtggcggcgggcctcgcgcgcccga
cgaggcgacgacgagtggtgcgcgtgcgccgaggaagagctgccggaggagacccgctcc
cgctgcaagctcgaggggctcaagtgtatcgagggtggcggcgggcctcgcgcgcccgac
gacgagtggtgcgcgtgcgccgaggaagagctgccggaggagacccgctcccgctgcaag
ctcgaggggctcaagtgtatcgagggtggcggcgggcctcgcgcgcccgacgacgagtgg
tgcgcgtgcgccgaggaagagctgccggaggagacccgctcccgctgcaagctcgagggg
ctcaagtgtatcgagggtggcggcgggcctcgcgcgcccgacgacgagtggtgcgcgtgc
gccgaggaagagctgccggaggagacccgctcccgctgcaagctcgaggggctcaagtgt
atcgagggtggcggcgggcctcgcgcgcccgacgacgagtggtgcgcgtgcgccgaggaa
gagctgccggaggagacccgctcccgctgcaagctcgaggggctcaagtgtatcgagggt
ggcggcgggcctcgcgagatgacactgccctacttttttccgcaaagtcaacaaacgagg
tctacgagttcgcacaacgcggatttaatgttgtaa
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