Cydia strobilella (spruce-seed moth): 134752141
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Entry
134752141 CDS
T10503
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134752141
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
134752141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
APC_N_CC
AAA_21
RNA_helicase
PEARLI-4
PilB3_C
RdRP_helical
DUF7217
AAA_25
Motif
Other DBs
NCBI-GeneID:
134752141
NCBI-ProteinID:
XP_063543805
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All DBs
Position
2:16930597..16955765
Genome browser
AA seq
1056 aa
AA seq
DB search
MPKNAKNKAAKAGSIYRIALQNFVTYKEVELFPGPSLNLIIGPNGTGKSTFVCAIILGLC
GKTSVIGRAKKISEYVRSGCQEATIEIELHREVNEPNVIITRIFNLQDASIWKINNKSVR
EKQVQELISTMNIQVDNLCQLLPQDRVQDFSKMNAQELLRSTLAAVGGHTSVEQLDELIK
TRAEQRGLSTRLQNNAQLLEEKIRQNERLKIIIDAMQQRKEMEKEILMCERKKYWIEYQE
LREKVNEYKGDKEKALKLVEIHSKKLEPLEKAFNKVKSGIGKLEQQKLNAAREVRVLKDK
LKETIEAVKAQEFTLRDKYSTLMEKVERHKNRERELGEARALLDKLITDKRKFDEEINED
AVKMELAQLHKKIAKENASIDGIKKQNMEIQFQLESNVTPVIRQHQNKIRSLENVDEKRL
EVLKHASEHTYKAVQWLRENRAMFQKKVYEPMILEINFTDPKFARYLEAKVASRDLFAFT
FECSQDMNQFTNIVRMEHGLRTVNAVSSEGYPALSHYRAQQKDIGQLSYLGFHTYLLDTI
TAPDPILRYLCGNYNIQNIPIGNDHTFKNCSKVPSHIKSFFTENHRINISVSRYSGATSS
STVEIGPARLLANTVDKDELDNHKTQLSELENKAKNMKAKMQDLQNKVTNLEMKLNDLNM
QRKKITENAEKLRALGIQIRLQEKKVQDIANERTFNLQEEKEKCRREQRNVVKKQCKLHQ
ELVGIMKKLQDKLLNGEMWKTKLDISRKATERQESQLRELEIALREAKHTLEDMEARYKQ
TNTKAHAKLKEAKKACASELLPQHPSFPFKEQFSELPAELDRLQEHCYELQTRMDCMDKG
DEQVIKEYEVREREIAKLKTDVSSNSDVHKELESKMSAIRAKWLPPLENLLRDIDNSFGE
MFAKLGCAGEIKLDKAGSDEDYDKYGISILVRFRTSEQLQQLTRHAQSGGERALSTAMYL
MSLQRLTTVPFRCVDEINQGMDPINERKMFHLLVKVTTECDNAQYFLLTPKLLTNLEYNP
KIMVHTIMNGKHIMNYKQWNYQDFLNNVKSYRPTNS
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaacgctaagaacaaggccgctaaagccggctccatttacagaatagcttta
cagaacttcgtgacgtataaagaagtcgagttgttcccgggcccgtctctaaatttgata
attggtccaaatggaactggaaaatcgacgtttgtttgtgccattatactgggactttgc
gggaaaaccagcgtcattggaagggcaaagaagatttcagaatatgtccgcagtggatgc
caggaggccaccatagagatagagctacaccgtgaggtcaatgaaccgaatgtcataatc
actcgcatcttcaacctccaagatgcaagcatatggaagatcaacaataagtctgttagg
gagaagcaggttcaggagctcatttctactatgaatattcaggtggacaacctctgccaa
cttctcccacaagaccgggtgcaggacttctctaagatgaacgcccaagaactcctgcgg
agtactctagcggcggtgggcgggcacacgagtgttgaacagctggacgaactgattaag
accagagctgagcagcgggggttgtcaacgagactgcagaacaacgcgcagctgctggag
gaaaaaatacgacagaacgagagattgaaaataattatcgacgccatgcaacaacgtaaa
gagatggagaaggaaatattgatgtgcgagcgaaaaaagtactggatagagtaccaggaa
ttgcgtgagaaggttaatgagtacaaaggcgacaaagaaaaggctctcaagctggtggaa
atccattcaaagaagttggaacctttggaaaaggctttcaataaagttaaaagtggaatt
ggcaaactggaacaacagaagttgaatgcagctcgagaagtccgtgttctaaaagacaag
ttgaaggaaacaatagaggcagtgaaagcgcaagagttcactttgagagataaatactct
actctgatggagaaagttgagcgtcataaaaatagagagagagagctgggcgaggccaga
gctttattggataagttgattacggataagaggaagtttgacgaggaaattaacgaggat
gccgtcaaaatggagttagcacaactacacaagaagattgcgaaggagaacgcgagcata
gatgggatcaagaaacaaaatatggaaatacagtttcagctcgaaagtaacgtcacgccc
gtgatacgacaacatcagaacaaaattcgcagcctagagaacgtggacgaaaaacgcctt
gaagtgctgaaacacgccagcgagcacacatacaaagcagtgcagtggctgcgcgaaaac
cgggccatgttccagaagaaagtttatgaacctatgatacttgagataaacttcacggat
ccgaaattcgctcggtacctcgaggccaaggtggcttcccgcgacctcttcgcgttcacg
ttcgaatgcagccaggacatgaaccagttcacgaacatcgtgaggatggagcatggcctg
cggaccgtgaacgccgtcagcagcgaggggtacccggcgctctcacactaccgggcgcag
cagaaggacataggacagctgagctatctcggtttccacacgtaccttctggatacaata
acggcgcccgatcccatcttgcgatacctgtgtggcaattacaatatacaaaacataccc
ataggaaacgaccacaccttcaaaaattgctccaaagtgccttcccacattaaatcattc
tttactgaaaatcatcgcatcaacatcagcgtgtcgcgctacagcggggcgacgtcgagt
tcgacggtggagatagggcccgcgagacttctagccaacactgtcgataaggacgagctc
gacaaccacaaaactcagctttcagaacttgagaataaggcgaaaaacatgaaagcgaaa
atgcaagatcttcaaaacaaagtaacaaatttagaaatgaaactgaacgacctgaacatg
cagagaaaaaagatcaccgaaaacgctgagaagcttagagcgctcggtatacagatacgt
cttcaagagaaaaaggtccaagatattgcaaatgaacgaactttcaatctgcaggaagaa
aaagagaaatgtagacgggaacagaggaacgtcgtgaagaagcagtgcaagttgcaccag
gaactagtaggcattatgaaaaaactgcaggataaattgctcaatggagaaatgtggaag
acaaaattagacatcagtagaaaggcgacagaaagacaggaatcacaattaagggaactt
gaaatagcattgcgagaggcaaagcatacgttagaagacatggaagcacgctacaagcaa
acaaatacgaaagctcacgctaaactgaaagaggcaaagaaagcgtgcgccagcgaactc
ttgccgcagcatccaagcttccccttcaaggagcagttcagtgagttgccggccgagctg
gatagactgcaggagcactgctacgagctacagactaggatggattgcatggacaaggga
gatgaacaggtgatcaaagaatatgaagtaagagaaagagaaatagcgaaattaaagacc
gacgtcagcagcaacagtgacgttcacaaggagcttgaaagcaaaatgagtgctatcaga
gcgaaatggctgcctccattggaaaacttactgcgggatatagacaacagcttcggagaa
atgttcgccaagctgggttgcgccggggaaatcaaactcgacaaagctggaagtgatgag
gactacgacaagtacggcatttctattctggtccgtttccggacgtctgaacaactgcag
cagctaacgcgacacgcgcagtcgggcggcgagcgcgctctctccacagccatgtacctc
atgtcgctgcagcggctcaccaccgtgccgttccgatgcgtggatgaaataaaccaggga
atggacccgataaacgagcgcaagatgttccatctgctcgtcaaagtcacaaccgaatgc
gataacgcccagtatttcctgttgacgcctaaacttctgactaatttggaatacaatcca
aagataatggtccacaccataatgaatggcaagcacattatgaactacaagcagtggaat
taccaggacttcttaaataacgtcaaatcctacagaccgacgaatagctag
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