KEGG   Cydia strobilella (spruce-seed moth): 134752301
Entry
134752301         CDS       T10503                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
cstb  Cydia strobilella (spruce-seed moth)
Pathway
cstb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cstb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134752301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cstb03400]
    134752301
Enzymes [BR:cstb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     134752301
DNA repair and recombination proteins [BR:cstb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     134752301
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase BRCT mRNA_cap_enzyme Spectrin_5 BRCT_2
Other DBs
NCBI-GeneID: 134752301
NCBI-ProteinID: XP_063544038
LinkDB
Position
2:complement(14226689..14234628)
AA seq 904 aa
MAEFTPFYVDRAKGSRASCKGCKGNCPSGEIRMAKIVASPYGENQQMKSWHHVDCLMNVL
IKQRPTTKRIDSIDDIGNWAAMTKDDQEFILKKINEMEKVYAEKNSGKYTAKVLKNESIP
KPVVASTSSSKDLEKQTDIKTEDDNFSQFAQLCKKIARVDAYTEKTAVVNNFFRKGSDGN
TFKGDLALWCKLLLPQVTKRVYNLKSKQLVKLFSRIFHTDQDDMLTHLENGDVADTITHF
FTKCKKIQPSTESTLSMQDVEEFLQGLSKLTKEDEQIYHFKKIVNKCTSDDLKMLIRLIK
ADLRINAGPKHILEGVHPDAYNVLQTSRDLGMVIDRILSESSGIKHKDDIQKSVSAKLTL
MTPVLPMLAEACKSIEMAMKKCPNGMFSEIKYDGERVQVHKRDNEFKYFSRALKPVLPHK
VSHFKDYLPQAFPKGVDLILDAEVLMVDVNTGKPLPFGTLGIHKKSEFKDAQVCLFVFDC
LYYNGKVLIDLPIRKRRQILHENMVEVTNHIMFSEQQTIEKPADLAKMIAEVLQLGLEGL
VLKDLESTYEPGKRHWLKVKKDYLFGGAMADTADLVVLGAWFGTGKKGGMMSVFLMGCWD
TRRNKWVTVTKVHTGHDDSTLERLQKELGPLMLKISQDSNKIPSWLDCNKGLVPDFVAKD
PKEQPVWEITGTEFTKANIHTADGISVRFPRVTKIRNDKDWKTATNLDELKNLYKTSKEK
TDVSLLNKLAATANDSYEPPKKKIKESPTSTLPKTDSFLKKDKVKKKEDLNISSSSDTMS
DTSNTSDRDSKTVKYQTQPENPFPDVFKNKRLGFYPDFISISEKKRTYFERHWIAYGGTV
VKSMRAVDVDFVVHNEGLIEFKKIQKLKKKLASGARHVTKDWLVKCINEIALCDTAKYAV
VVEP
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggcagaatttacgccattctacgtagatcgtgcaaagggcagccgagcttcgtgtaag
ggctgcaaaggaaactgtcctagtggagaaattcgcatggcgaaaatagtcgctagccct
tacggagagaatcaacaaatgaaatcatggcaccacgtcgactgcttaatgaatgtcttg
ataaaacagcggcctaccacaaaacggatagattccatcgacgatataggcaattgggca
gctatgaccaaggacgatcaagagtttattcttaaaaaaataaacgaaatggagaaagtg
tacgctgaaaaaaatagcggtaaatacacagctaaggttttaaaaaatgaatcaatacca
aaacctgttgtcgcaagtacaagttcttctaaagacttggaaaaacagacagatattaag
acagaggatgataatttttcgcagttcgctcagttgtgcaaaaaaattgccagagttgat
gcatatactgaaaaaacggcagttgtaaataatttttttagaaaaggttcagatgggaac
acatttaaaggtgatctcgcattgtggtgtaaactgttattgcctcaagtcactaaacgg
gtttacaacttaaagagtaagcaacttgtaaaattgttttctagaatattccatactgat
caggatgatatgttaacacatttggaaaatggagatgtggcagataccatcactcatttt
tttacaaaatgcaaaaaaattcaaccaagcactgaaagtactttgtctatgcaagatgtg
gaagaatttcttcaagggctctcaaaattaacaaaagaagatgaacagatatatcacttc
aagaaaattgtaaacaaatgcacttcggatgaccttaaaatgcttattcgcctaattaaa
gcagatttgcggattaatgcagggccaaaacacattttggaaggtgttcatccagacgca
tataatgtattacaaacttcaagagacctcggaatggttatagacaggattctgtcagaa
agcagcggaatcaagcataaagatgacattcaaaaaagtgtcagtgcaaagctcactctt
atgactccagtattaccaatgcttgccgaagcttgtaaatcaatagaaatggctatgaaa
aaatgtcctaatggaatgttctctgaaattaaatatgatggagagagagtgcaagtacat
aaaagagacaatgaatttaaatatttttctagagctttgaagccagtgttgccacacaaa
gtcagtcattttaaagattacctacctcaagcatttccaaaaggagtagatttgatatta
gatgcagaagttttgatggtagatgtgaacactggcaaaccgctaccgtttggtacattg
ggaatacataaaaaatcagagttcaaagatgctcaagtgtgtttgtttgtatttgattgc
ctttactataatggaaaagtgctgattgatctaccgataaggaaaagaagacagatatta
catgaaaatatggtggaagtgaccaaccatattatgttttcagagcagcaaacaatagaa
aaaccagctgacttagccaagatgattgctgaggttctgcaacttggattggagggactg
gtgcttaaagatctggaatcaacttatgaaccaggaaagaggcattggcttaaagttaag
aaggactacttgtttggtggggccatggctgacactgctgatctggttgtactaggggct
tggttcggaactggtaagaaaggtggcatgatgtcagttttccttatgggttgctgggac
acccgtcgcaacaaatgggtgactgttacaaaagtccacactggccatgacgacagcacg
ctagagaggcttcagaaggagcttggaccactcatgttgaagatttctcaggacagtaac
aaaataccatcctggttggattgcaacaagggcctagtgcctgactttgtggctaaagac
cctaaggagcagcctgtatgggaaattactggtaccgagtttacaaaagcaaacattcac
accgccgacggaatatcagtaaggtttccaagagtcacaaagataaggaatgacaaggat
tggaaaacagcgactaacttagacgagcttaagaatttatataaaacatcaaaagagaaa
acagacgtctcacttttaaacaaactagctgctactgctaacgattcgtatgaaccacct
aagaaaaaaatcaaagaaagtcccacgtctacactccctaaaacagactcgtttttaaag
aaagataaagtaaagaaaaaggaagatttaaatatctctagttcatcagatactatgagt
gatactagtaacacaagtgatcgagatagtaaaacagtcaaataccaaacgcaaccagaa
aatccatttccagatgtttttaaaaataaacggttaggattttacccagatttcattagc
atatctgaaaagaagagaacctattttgaaaggcattggattgcatacggtgggactgta
gttaaatcaatgcgtgcagtggatgtagatttcgtagtgcataacgaaggtcttatagaa
ttcaaaaaaattcaaaaactgaagaaaaaactggcatctggcgcaagacacgtaactaag
gattggttggtaaaatgtatcaatgagattgcattatgtgatacggcaaaatatgctgtt
gttgtagagccctag

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