Cydia strobilella (spruce-seed moth): 134752418
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Entry
134752418 CDS
T10503
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134752418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cstb04121
]
134752418
Enzymes [BR:
cstb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134752418
Ubiquitin system [BR:
cstb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134752418
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134752418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
zf-C3HC4_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR19_1st
Beta-prop_DCAF4
zf-C3HC4
zf-RING_UBOX
Beta-prop_CAF1B_HIR1
Beta-prop_EML
zf-RING_2
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_3
Beta-prop_HPS5
zf-C3HC4_4
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Type_III_SycN
WD40_RFWD3
Beta-prop_DCAF12
zf-RING_10
zf-rbx1
Beta-prop_IFT140_1st
Zn_ribbon_3
Sina_RING
DZR_2
TRAF3_RING
DZR
WD40_like
Motif
Other DBs
NCBI-GeneID:
134752418
NCBI-ProteinID:
XP_063544198
LinkDB
All DBs
Position
24:4637991..4678370
Genome browser
AA seq
1014 aa
AA seq
DB search
MSGTAGSSSSAALGGLGGSLEDKDCELLCPVCFELIDEAYVTRCGHSFCYACIAKSVEQH
RRCPKCGAAVASRDHMFPNFMLNELVARRRLRAARPPSQASEGGDAARLRALLAAESARL
AMPDVELMLEVLTRRKRLLEAESAAAHHRLLYEFLAQLHRHRQQQLQQLAREAALVQTDM
EHVAGTLRLHRHRQQQLQQLAREAALVQADMEHVAGTLRSSTVTSTPPSPVRVPCTAAPA
SSAASSNNSLGKRHLFKLTWSTWPARCGCTGIVSSSSNNSLVKRHLFKLTWSTWPARCGC
TGIVSSSSNNSLVKRHLFKLTWSTWPARCGCTGIVSSKLQQLAREAALVQADMEHVAGTL
RLHRHRQQQLQQLAREAALVQADMEHVAGTLRVSTVTILHRLLYEFLAQLHRHRQQQLQQ
LAREAALVQADMEDVAGTLRDLKAGAAGLASFPSEDGESGPASDAVRALRKELTELAGSV
SDSAAAPPSPDDEEGFAGAAGENPLHNSTFNRWRRLVAHFEDFVQCYFAHRADELYFPAP
AGTPAPLVTSAPSFTTVASVTTVAGHDDQVPDNDPTSKNTNFPAPAVTRAPLVTSAPSFT
TVASVTTVAGHDDQVPDNDPTTAIKPSFVNGDQRLPESSPTEAPRAPPAPSPSATLSKGE
GGGGGLDAFREDLVAFTRYRALRPLATLSYSSDAINYSTIVSTIEFDKDEEFFAIAGVTK
RIKVFEYEAVVRDAVDVHYPCAEMQCAHKISCVSWNAYHKNVLASADYEGTVAVWDAGTG
QRTRALLEHDKRCWSVHFNRADVRLLASGSDDARVKLWALNAERSVATLEARFNVCCVRF
NPRSSCHLAFGSADHCVHYYDLRAPRAPLAVFRDHRKAVSYVKFLDARTLVSASTDSQLK
LWKVESPRCVRSFTGHANEKNFVGLATEASGRYVACGSENNALYVYYAGLSKPLLAHRFD
AVRGFLERGTGGERREDEPSEFVSAVCWRRAPPSERQVLLAANSQGTIKVLELV
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaccgctggttcaagcagcagtgcagccctcggagggcttgggggctcctta
gaagacaaggactgcgagctattgtgtccggtctgcttcgagctcattgatgaggcgtat
gtgacgagatgcggccactcattctgctacgcttgtattgccaagagtgttgaacaacat
agacggtgtccaaaatgcggcgcagcagtcgccagccgcgaccacatgttcccaaacttc
atgctcaacgagctggtcgcacggcggaggctgcgcgccgctcggcctccctcgcaggcc
tccgaggggggcgatgcggcgaggctacgggcgttactagcggcagagagcgcaagacta
gctatgcctgatgtcgagcttatgttagaggtgctaacgcggcgaaagcgtctgctcgaa
gccgaatcagcggccgcgcaccaccgtctcctgtacgagttccttgcacagctgcaccgg
catcgtcagcagcagctccaacaactcgctcgtgaagcggcacttgttcaaactgacatg
gagcacgtggccggcacgctgcggctgcaccggcatcgtcagcagcagctccaacaactc
gctcgtgaagcggcacttgttcaagctgacatggagcacgtggccggcacgctgcggtcg
agtacagtgaccagtactccaccgtctcctgtacgagttccttgcacagctgcaccggca
tcgtcagcagcaagctccaacaactcgctcgggaagcggcacttgttcaagctgacatgg
agcacgtggccggcacgctgcggctgcaccggcatcgtcagcagcagctccaacaactcg
ctcgtgaagcggcacttgttcaagctgacatggagcacgtggccggcacgctgcggctgc
accggcatcgtcagcagcagctccaacaactcgctcgtgaagcggcacttgttcaagctg
acatggagcacgtggccggcacgctgcggctgcaccggcatcgtcagcagcaagctccaa
caactcgctcgggaagcggcacttgttcaagctgacatggagcacgtggccggcacgctg
cggctgcaccggcatcgtcagcagcagctccaacaactcgctcgtgaagcggcacttgtt
caagctgacatggagcacgtggccggcacgctgcgggtgagtacagtgaccatactccac
cgtctcctgtacgagttccttgcacagctgcaccggcatcgtcagcagcagctccaacaa
ctcgctcgtgaagcggcacttgttcaagctgacatggaggacgtggccggcacgctgcgg
gatttgaaagcgggcgcggcgggcctggcctcatttccttcggaagacggcgagtccgga
ccggcgtctgacgctgttagagctctgagaaaggaactaacagagctggctggttccgtc
tcagacagcgcggcggcgccaccgtcgccggacgacgaggagggcttcgctggcgccgcg
ggcgagaacccgttacacaacagcacgttcaacagatggcgccgcctggtggcacacttc
gaggacttcgtgcagtgctacttcgcgcaccgagcggacgagctgtacttccccgcgccc
gctggcacgcccgctccgcttgtgacgtctgcgccgtcgttcacgaccgtggcctcagtc
actaccgtggctgggcacgatgaccaggtcccggataacgatcctaccagtaagaacact
aacttccccgcgcccgctgtcacgcgtgctccgctcgtgacgtccgcgccgtcgttcacg
accgtggcctcagtcactaccgtggctgggcacgatgaccaggtcccggataacgatcct
accaccgcaataaaaccgtcatttgtgaacggtgaccaacggttgcccgaaagttccccc
accgaggcgccccgcgcgccgcccgccccctccccctccgccaccctcagcaagggggag
ggcgggggagggggcttagacgcctttagagaggatctcgttgccttcactagatatagg
gcgctgaggccgctagctacactatcttattccagcgacgccattaattattctactatc
gtatctactatagagttcgacaaagatgaagaattcttcgccattgccggcgtgacgaag
cgcatcaaggtgttcgaatacgaagccgtggttcgtgacgccgtggacgtgcactacccc
tgcgctgagatgcagtgcgctcataaaattagctgtgtatcttggaacgcgtatcataag
aatgtgctggcgtcagcagactacgaaggcacagtagcggtatgggacgcgggcaccggc
cagcgcacgcgagcgctactcgagcacgacaagcgctgctggtcggtgcacttcaaccgt
gccgatgtgcggctactagctagtgggtccgacgacgcgcgcgtcaagctgtgggcgctc
aacgccgagagatcagtggcaacactagaagcacgcttcaacgtgtgctgcgtgcgtttc
aacccgcgctcgtcctgccacctggcgttcgggtcggccgaccactgcgtgcattactac
gacctcagggcccccagggcgccactggccgtcttcagggaccacaggaaagcggtgtcg
tacgtgaagttcctcgacgcacgaacgctcgtgtccgcctcaacagactcacaacttaaa
ctatggaaggtggaatccccccgctgcgtccgctccttcaccgggcacgcgaacgagaag
aactttgtaggcctcgcgacggaggccagcggccgctacgtggcctgcggctccgagaac
aatgcgctgtacgtgtactacgcgggcctgtccaagcccctgctcgcgcaccgcttcgac
gccgtgcgggggttcctggagagaggtaccggtggcgagaggcgggaggacgagccgtca
gagttcgtctcggcggtgtgctggcgccgcgcgccgccttcagagagacaagtactcctc
gccgctaacagccagggcacaatcaaagtactagaacttgtctag
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integrated database retrieval system
