Cydia strobilella (spruce-seed moth): 134752784
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Entry
134752784 CDS
T10503
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
134752784
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134752784
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
134752784
NCBI-ProteinID:
XP_063544558
LinkDB
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Position
25:6896691..6908721
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AA seq
1791 aa
AA seq
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MEPDCYLVEVIHYLNPHLIWVRNPSTDTMEQIGVYGVVPLDKELMLDTQEIETRRSNTWM
QAATYVLMKVFMDATAVWFQPIHIDRRTSIFDTNIHKYGELLIQKNDGHKRKLSSYLRKS
ETALYDDAVFHQQLSSGLIQTKLTKTETDEVMKVIASKLTDYESVVAFKKQTEVYQVAKK
LEILTTENLNKHNSRLNKNITNKDILNVLDRKFKDFQLCKDLDDEPLGRATKKTKTSESN
SFSRLDKLKTLCGKTNVAKYDDFNDAKPEKHKAYDDYNDSKGSYSQNTHGYQMNVAESRM
RAALPDDGSVAKEDESSASFQPGRNFKNKKYDKPAQNKPPEYDVKTHMQVAYSPPGVDKS
KLALKIVPIQQESAIETYKIYKEDDTNVMNPKDYTNMMKPKDDMYGEVDSGVNITITNKD
VLKKYNNLNESKSEGTEKQNNIFSKYNDTGKGDLKGVTEQNNEEKAKSDVSSSDGGALTS
KLLQRRLNMVKIMKENSSSSSNTTTSSRKVKKNDGSATDTTSKDSDDDEMYELIEKYTAS
LKANAEIAEKKDDKTVDLVAKKNNVNPFQNVDSNLSVFVDKLVKPVLMVHTKNNSRIEPL
VALSDIPFNAHVHNVLRNMKIDQAMTMQSVSWMSVLKGFSTFLIGPQACGKTMGYLPSIC
RLISDFDNDIVNSVGPTCIIVAATAQSVSDIEYNCRMLLGTKETIFTCYAGMDLLKITTS
LLNGCNLFICTPCVLVRLLLLTDFGLDLRRLTTFVLDDCERLGEVYKSEIKIALSKIKHM
LKARVNKEVKVQYILASRVWCDFMEPLAKNAPNTVVCIGAFQECVLYSKANTTVEFVKPE
NKIAKVLEFVQKMDKKKKTIVVCRTDEEVIELEKILKEQHAVVYACNNEMTVEDLRNFNI
TWDKYADPTIGPILVCCDGNLSHMNITDAHNLVHYSMPELFSRFCKRFSVLNDNYPSIFR
KENESVAIRIILEDSNAEQLPKICNFIKRCTKEFPSDLDVICKEIVTKKEMVKAANFVPI
CGNLLALGDCPDFWYCRERHTSSEIHDEPKEWMPTDGVITFRILHYQTAVTYSVRLLSNI
KKGGTKKYPQTYSTLSFKMGTYFSQDSNKKLLGVPKIGDVCAVAINQDFYVRCQVVDIIN
KYRNGLPNYVLIKLIDEEKLETSRDIYLYHLPKEFRDVETYVAEVSLAGVLPKDKDITFS
ELAKNHIKKGLKNNESLYMRGKVVLTIGNRIFVDNIDVCQDLTSMNEVVVKTNFKEMLSA
HSEVFPDHIMRIKSRLFAEEEMTTENTDFEQVEDVKPIKEPPKVQWAHLNREDLSLVYFT
SAVDPSTFFVRLVKFKDTMDSLCKDIKKYIEGNPEPLKEVKEKDVVLAKFQDSKCYERGR
VDSVEGSKAKCFFVDYGDWREVPLKDLTEIPDKFVLRLPFQAIECRLLGVKPVGDTWTDF
STNWLCDRCDVEDDQDLKGLYVQYYSTDKAKFTGGNKYAVALIDTNNDCDVVYNTQMINL
NLAAPDEDEIEILKNINFKRPQEKDVESNDEEDWSNDAYDKSARLSNEPIRSVPLVEDSD
TDSDRWSVNMPDDIVNTFRADAKSLEMPKIKSDTSSIASSNKIDNDSVTSEFEVVKKPQI
KELDSDDLSTSESASITEKSEIIKEANEGRKPKLLWRQDKTSVTVKIMLVGAENYKLKIQ
ERELNFSADIYDTNYNFKINLYGIVDKNKSSDAYKGQYILVKLVKVMHKTWLTLTKDTSL
AKWIVYDHDSIDTSSEEEDALDDNIAKIIKNNYREDDSDSDSFCDDESYPS
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgattgctatcttgtggaagtcatccactatctaaatccccatttaatttgg
gtccgcaacccgtctaccgacaccatggagcaaattggtgtttatggtgtcgtgcctctg
gataaagaacttatgctggatactcaagagatagagacgaggcgcagcaacacctggatg
caggcggcgacctatgttttgatgaaagtattcatggacgctacggcggtgtggtttcag
ccaattcatatagatcgaagaacctcaatttttgataccaacatacataaatatggcgag
cttttaatacagaaaaatgatggtcacaaaaggaaattatccagctatctcagaaaatcc
gaaactgctctatatgatgatgctgttttccaccaacaactcagttcagggctcattcaa
acaaaactaactaaaacagaaacagatgaagtgatgaaagttatcgctagtaaattaacg
gattatgaatctgtcgttgcatttaagaaacaaactgaagtataccaagtcgctaaaaag
ctagaaatactaactacagaaaacttgaacaagcataacagcagactgaataaaaatatc
actaacaaagacattttgaatgtcctagacaggaagtttaaagactttcaactgtgtaaa
gatcttgatgatgaacctctaggtagagctactaaaaagaccaaaacatctgaaagtaac
tctttttcacgtcttgacaaacttaagacactatgtggtaaaactaatgttgctaaatat
gacgactttaatgatgcaaagcctgagaaacataaagcttatgatgactataacgattca
aaaggtagttatagtcagaacactcatggatatcagatgaatgtagctgagtcaagaatg
cgggcagcattaccggatgacggctctgtggcaaaagaagacgagagcagcgcgagtttc
cagcccggaaggaatttcaaaaataagaaatacgacaaacctgcacaaaataaaccacct
gaatatgatgtgaaaacacacatgcaagtagcatacagcccacccggcgtcgacaagtcc
aaacttgccctcaaaattgtaccaatccaacaagaaagtgctattgaaacatataaaatt
tacaaagaagatgacactaatgtaatgaatcccaaagattacactaatatgatgaagccc
aaagatgacatgtacggtgaggtcgactctggtgttaacatcactatcacaaataaagat
gttttgaaaaaatacaacaatttaaatgagagcaagtctgaaggtacagaaaaacaaaac
aatattttttccaaatacaacgatactggcaaaggcgatcttaaaggtgtaacagagcag
aataatgaagaaaaagccaagtctgatgtttcctcaagtgatggtggtgctttaacgtcc
aagctccttcaaaggaggcttaatatggtaaaaataatgaaggaaaatagtagttcatct
tcaaataccacaaccagttcgagaaaggtaaaaaagaatgacggcagtgctactgacaca
acaagcaaggactctgatgacgatgaaatgtatgaacttattgagaaatataccgctagt
cttaaagctaatgctgaaattgccgaaaaaaaagatgataagactgttgatttagttgcc
aagaaaaataatgtcaacccctttcaaaatgtagactcaaatctgtctgtatttgtagat
aaattagttaaacctgtactcatggtgcatactaaaaacaattctcggattgagccttta
gttgcgttaagtgacataccatttaatgctcatgtgcataatgtgcttagaaatatgaag
attgatcaagccatgactatgcaatctgtgtcttggatgagtgttctcaaaggattcagt
accttcctcattggaccacaagcgtgtggtaaaaccatgggatatttaccatcaatatgc
cgacttatatcggattttgataacgatattgtgaacagtgtcgggcctacttgtataata
gtggctgccactgcacaatctgtttctgatattgagtataactgtaggatgcttctcggt
actaaagaaacgattttcacctgctatgctggtatggacttgttgaaaatcaccacatct
ttgctaaatgggtgcaatcttttcatttgcacgccctgcgttttagtcaggttgctgcta
ctaaccgattttggtttagatctgcgtcgtttgaccactttcgtactcgatgattgcgag
aggctcggggaggtctacaaaagcgaaataaaaatagctttgtccaaaattaagcacatg
ctgaaagcaagagtcaacaaagaagtgaaagtccagtacattttggcttcgagagtgtgg
tgtgattttatggaaccacttgcgaaaaatgcaccaaacacagtagtttgcataggtgcc
ttccaagaatgtgtgctttattccaaagccaacactacagttgaatttgtaaagcctgaa
aataagattgcaaaagtgctggagtttgtgcaaaaaatggacaaaaagaagaaaaccatt
gtagtctgtcgaacagacgaagaagttattgaacttgaaaagattttaaaagaacagcat
gcagtggtgtacgcttgcaataatgaaatgacagttgaagatctgaggaattttaatata
acatgggacaagtatgccgaccctacaattggtcccattctcgtgtgttgcgatgggaat
ttgagccatatgaatatcacagatgctcacaacctggttcattattccatgccagaactg
ttctctaggttctgcaagcgtttctcagtgctaaatgataattatccttctatatttaga
aaagaaaatgagagcgtggctataaggatcattctagaagacagtaacgcagaacaactt
ccgaaaatctgcaacttcatcaaacgatgcactaaagaattcccttcagatttggacgtc
atttgcaaggaaattgtgaccaaaaaggaaatggtcaaagccgctaatttcgtgcctatc
tgtggaaatctgctggctttaggagattgccctgacttctggtattgcagagaaagacat
acgagttcggaaattcacgatgaacccaaagaatggatgccaactgatggtgtaatcacc
tttaggattttgcactaccagactgcagttacgtactctgttcgtttattatcaaacata
aagaaaggaggcaccaaaaagtacccacaaacctacagtacactctccttcaagatgggg
acatattttagccaggatagtaataagaaacttctcggcgttccaaagatcggtgacgtc
tgcgcagtggcgataaaccaagacttttacgtgagatgtcaagtcgtcgacataatcaat
aaatacagaaacggtctaccaaactatgtattaataaaactcattgacgaggaaaaactg
gaaacctcgcgggatatttacctgtaccatctaccaaaagaatttagggatgttgaaact
tacgtagctgaagtgagcttagcaggtgtcctgccaaaagacaaggatataacattctcg
gaactggctaaaaaccatataaagaaaggcttgaaaaataatgaaagcttgtatatgaga
ggaaaagttgtcctgacgattggcaaccgaatattcgtcgacaacattgatgtgtgccaa
gacttaacatccatgaacgaggtcgtggttaaaaccaacttcaaggaaatgttatcagcg
cattctgaagtattccctgatcatataatgagaataaagagccgcctattcgccgaggaa
gaaatgactacggagaacacagattttgaacaagttgaagacgtaaagccaattaaagaa
ccgcctaaagtacaatgggcgcatttaaatcgtgaagacctgtcgttggtctattttaca
tcagcagttgatccgagcacgtttttcgtccgtttggtcaaatttaaagacactatggat
tccctctgtaaagatatcaagaagtatatagaaggtaatcctgagccactgaaagaggtt
aaagagaaagacgtagttttggctaaatttcaggacagtaaatgctacgagcgaggtcga
gttgacagcgttgaaggcagtaaagcaaaatgctttttcgtagactatggagactggagg
gaagtgcctttaaaggatttgacggaaatccctgataaatttgtgcttcgcttacctttc
caagcgatcgaatgcagacttctgggtgttaaacctgtgggcgacacatggacggacttt
agcaccaactggctttgcgaccgatgcgacgtcgaagacgaccaagacttgaaaggactt
tatgtccaatactactcgactgacaaggcgaagtttaccggcggtaacaaatatgcagta
gcattaatagacactaacaatgactgtgacgttgtatataacacacaaatgatcaacctt
aatttagctgctccagatgaagatgaaattgagatactcaaaaacatcaattttaaaagg
ccccaggagaaagatgttgaatctaatgatgaagaagactggagtaatgatgcatacgat
aaatcagctaggctttctaatgaacctatcaggtcagtgcctttagtagaagacagtgac
acagacagtgataggtggagtgtcaacatgcctgatgacatcgttaatacttttagagct
gatgcaaaatccctagaaatgcctaaaataaaatcagacacctcttcaatagccagttcc
aacaaaattgacaatgattcagtgacaagtgaatttgaagtcgtgaaaaagccacaaatt
aaagaattagactctgacgatctatctacttctgagagcgcaagtataactgagaaatca
gaaataatcaaagaagctaatgaaggtagaaaaccaaaattactgtggagacaagataaa
acatcagtgacagtaaaaattatgttagtaggggctgaaaattataaattgaaaatacaa
gaacgagaattaaatttctcagcagacatatatgacacaaattacaattttaagatcaat
ttatatgggatagttgataagaataaatcttcagatgcttataaaggacaatatatactt
gtaaagcttgtcaaggtgatgcataaaacctggttgactctgaccaaagatacttcttta
gctaaatggattgtctatgatcacgattccatagacacatcatcagaagaggaggatgca
ttagacgacaatattgccaaaattataaaaaacaattatcgtgaagacgattcggatagt
gattcgttttgtgatgatgagagctatcctagttag
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integrated database retrieval system
