Cydia strobilella (spruce-seed moth): 134753505
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Entry
134753505 CDS
T10503
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134753505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134753505
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
134753505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
NorB_cytochrome_c-like
RB_A
Motif
Other DBs
NCBI-GeneID:
134753505
NCBI-ProteinID:
XP_063545470
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Position
27:3724463..3746880
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AA seq
735 aa
AA seq
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MANPATAPAPVVEENPEIDWGNERLQRAQRAVEANTYDVDSWSLLIREAQTRPINEVRSV
YEKLITAFPTTGRYWKIYIEQEMKARNFEKVEKLFQRCLMKILNIELWRLYLNYVKETKC
MLPTYKEKMAQAYDFALDKIGLDIHAYPIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQ
RAVITPIIGIETLWKDYIAFEQSINNIIAERMAMERSRDYMNARRVAKELETVTRGLNRN
MPATPPTVDREEMKQVDLWKKYITWERSNPLRSEDTALVARRVMFAIEQCLLCLAHHPDV
WHQAAQFLDHSAKLLTEKGDSNAARLFSDEAAAVYERATSGPLKRSTLLHFAHADYEESR
LHYNKVHQVYTRYLDMEDIEPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRSAYHVFV
AAALMEYYCSKDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSS
GSLKPESSVDIWNRFLEFESNIGDLVSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFL
DLYPCSIAELKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQKDNDPNKDIARPDT
NQMIPYKPKANPLPGEHPISGGTFPLPPAAAHLCTLMPPPTSFRGPFVAVDRLMQLFNRI
SLPDKPPLPTQENGCDTKLFDLARSVHWIVDDEGITTVANKSRRRKAGEDSDDDDLSVAP
PLNDIYRARQQKRVK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccagccactgctccagctccagtggtagaagagaacccagaaattgattgg
ggtaacgagcgattacaacgagcgcagcgggcagtagaagcaaacacatacgatgtcgat
tcgtggtcactcctgattcgggaagctcaaacgcggcctatcaatgaagttcggtcggta
tatgagaagctgatcacagcgttcccgacgacgggacggtattggaagatctacattgag
caggagatgaaggcgcgaaactttgaaaaagtggaaaagttattccaacggtgtctgatg
aagattctgaacatcgagctatggagactgtacctcaactacgtaaaggaaacgaagtgc
atgttgccgacatacaaagagaagatggctcaagcttatgacttcgccctggacaagatt
ggactagatatccacgcgtatcccatctggaacgactatgtcacgtttcttaaaagcgtg
gaggctgtgggatcgtatgctgagaatcagaagatatctgctgttcgaaaggtgtatcag
agagcagttatcacccccatcatcggtatagaaacattgtggaaggactacattgccttt
gaacagagcatcaacaatattattgccgaaagaatggcaatggagcgatcccgcgactac
atgaacgctcgtcgcgtcgcaaaagaattggagacagtcacccgcggtctcaatagaaac
atgccagccacgccccctaccgtcgatcgagaggaaatgaaacaggtggacctatggaag
aaatacataacctgggagcgttctaacccgctccgttccgaagacacagctttggtcgct
cgtcgagtcatgttcgccatagaacagtgtctcctttgtttggcacaccatcccgatgtt
tggcaccaggctgcccagtttctggaccattcggcgaaacttttgactgaaaagggggac
tcaaacgcagcccgcctgttctccgacgaagcggcggcggtgtacgagcgcgccaccagt
ggccctctaaagagatccacgttgttgcactttgcccatgccgactatgaggagagccgg
ctacattacaataaggtgcatcaagtatacacccgctacttagatatggaagatatcgaa
ccaacattggcctacgtacagtacatgaaattcgcgagacgagccgaaggcattaagtca
gcaagaaccgtgttcaaacgcgccagagaggatcctagatcagcctaccacgtgttcgta
gcggcagccctaatggagtactattgctcaaaagacaagaacatcgccttcagaatcttc
gagctgggtttgaagaagttctcgcatataccagagtatgtgctgtgctatattgactac
ctgtcacatcttaacgaggacaacaatacgcgcgtactgttcgagcgagtgctgtcttct
ggcagtttgaagccggagagctccgtcgatatctggaacaggtttctggagttcgagtcc
aacatcggtgacctggtgtccatcgtgaaagtggagaagcgtcggcaggccgtgctcgag
aagatcaaagaattcgaaggcaaggagacggctcaactggtagacagatacaagttctta
gatttgtatccttgcagcatcgcggagctcaagtcaattggttacactgaggtggcgtcc
atgtcaaacaagtcctgggctctcggcggccccttggccgggatatctcctgaactggca
gctgttatacttggacagaaagataacgacccgaacaaggacatagcccgcccagacacc
aaccagatgatcccctacaagccgaaggcgaaccctctgcccggcgaacaccctatttcc
ggtggcaccttccccctgcctcccgcggcagctcacctctgcaccctcatgccgccaccg
acttccttcaggggaccgttcgtagctgtcgaccggctcatgcagctcttcaacaggata
tcattgcctgacaaaccgcccctgccgacgcaggagaacggctgcgacaccaagctgttc
gacctggcgcgctccgtgcactggatcgtggacgacgaggggatcaccaccgtcgccaac
aagtctcgcagaagaaaggccggcgaagattcggatgacgacgacttgagcgtggcgccg
cccctcaacgacatctaccgcgcccggcagcagaaacgagtcaagtag
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