Cydia strobilella (spruce-seed moth): 134753950
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Entry
134753950 CDS
T10503
Name
(RefSeq) probable nucleoporin Nup54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134753950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134753950
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134753950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF7036
Motif
Other DBs
NCBI-GeneID:
134753950
NCBI-ProteinID:
XP_063546049
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All DBs
Position
Z:complement(52430412..52473247)
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AA seq
587 aa
AA seq
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MSFNFSPNVPPPVVFGTAAKRTPFGTLAASAASTGASMFGGSTFGTTTTKPTTGFSSFGN
TTATSIGGTGSLAFGGGASTFGSTAPTFGSTAPTFGSTAPTFGIAAPTFGSTGPAFGSTA
PTFGSTAATFGTGVPAFGSSAPAFGTNTLTTNSFGGTSTGSTFGSTFGQKPATSGFGGFG
TGLASAFGQQNQQPQQQQQGPGSAHEALVAAVFNCSVFGDERDQVLAKWNLLQAQWGNGH
AYYSRNAPRLQLNEQNPLCRFKAVGYSRLGTHEDKDGLVVMMFNKSVQEINTNKQVLQTS
LSNLFGNKPNLVVTIDSVGAVTDNKSQVVIYVVDKNANNAHISATELASFLNAGAARTAL
NGAGCSNITAVTRPTPQALAQYLQTPPPGMDMRLWKQAQADNPDPDNYIPVPIIGFSEIK
SRARIQGEEANLQAEWLKRTADTLAELRTRRAAAAARLAQLSAKLHALRHTLLQAIGRKE
VMGRVGAALSPEEEAVRARLHELASTLSTPPLYNGRLNELLSAVRLQRSAIGSGSHERYQ
LDPGAQEDLKQFLTLQQRGMAHLLDTAWKDLDALNTITEGMSRLVRA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaacttttctcctaacgttcctccacctgtggtattcggcaccgccgccaaa
cgtacaccatttggaactttagcggcttcagctgcatccactggggcttcaatgtttggg
ggctccacctttggcactactaccacaaaacccacaacaggatttagttcttttgggaat
acaactgcaacatcaattggtggcacaggaagtttggcctttggtggtggtgcttcaact
tttggtagtactgcaccaacatttggcagtacagcaccaacatttggcagtacagcacca
acttttggcattgcagcaccaacgtttggcagtacaggaccagcgtttggtagtactgct
cctacctttggcagtacggctgcaaccttcgggacaggagttccagcttttggaagctca
gccccagcatttggcacaaatactttgactacaaactcctttggaggaacaagcactgga
tcaacatttggttcaacttttggacaaaagcctgcaactagtggttttggtggatttggc
acaggactggcctcagcatttgggcagcaaaatcagcagccccagcaacagcagcaaggt
ccagggtcggctcatgaggcacttgtggctgcagtgttcaattgttcagtgtttggagac
gagagggaccaagtgctcgccaaatggaaccttttgcaggcacaatggggcaatggtcat
gcatactacagccgtaacgcgccgcgcctacagttaaacgagcagaatcctctgtgccgc
ttcaaggcggtcggatactctcggctcggcacccacgaggacaaggacggccttgttgtg
atgatgttcaacaagtctgttcaggagattaacaccaacaagcaagtactccagacttcg
ttgagcaacttgtttggtaacaagccgaatttggtagttaccatcgattcagtgggagca
gtgactgataataaaagtcaggtggtgatatatgtggtcgacaaaaacgccaacaacgct
cacatatccgcgacggagctggcctcgttcctgaacgcgggcgcggcgcgcacggcgctg
aacggcgccggctgtagcaacatcaccgccgtcactcggcccacgcctcaggcgctcgcg
cagtacttgcagactcctccacctggaatggacatgagactatggaagcaagcacaagct
gacaatcccgatcccgataactatataccagttcccatcatcggcttttccgagatcaag
agtcgagcacgtatccagggcgaggaggcaaacctgcaggccgagtggctgaagcgaacc
gcggacaccctggccgaactacggaccaggcgagccgccgccgcagcacggctcgctcag
ctgtcggccaaactacatgccctgaggcacacgctactacaggcgatcggtcgtaaggag
gtgatgggccgagtcggcgcggcgcttagtccggaggaagaggcagtgagggcgcgtctg
cacgagctagcttccactttgtccaccccaccgctgtataacggccgcctgaacgagttg
ctgagcgctgtgcgactgcagcggagcgccatcggcagcgggtcccatgagcggtaccaa
ctagatccaggtgcacaagaagacttgaaacaattcctgacactacagcagcgcggcatg
gctcacctcctagacacggcatggaaggacttggacgcgctaaacacgatcacggaaggc
atgtcccgcctagtacgagcctag
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