Cydia strobilella (spruce-seed moth): 134754178
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Entry
134754178 CDS
T10503
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03030
DNA replication
cstb03410
Base excision repair
cstb03420
Nucleotide excision repair
cstb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134754178
03410 Base excision repair
134754178
03420 Nucleotide excision repair
134754178
03430 Mismatch repair
134754178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cstb03032
]
134754178
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134754178
DNA replication proteins [BR:
cstb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
134754178
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
134754178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_14
AAA_5
NTPase_1
AAA_17
AAA_33
AAA_assoc_2
AAA_16
BRCT_2
RuvB_N
AAA_19
AAA_18
RCF1-5-like_lid
RNA_helicase
AAA_6
nSTAND3
Motif
Other DBs
NCBI-GeneID:
134754178
NCBI-ProteinID:
XP_063546377
LinkDB
All DBs
Position
Z:35095189..35140699
Genome browser
AA seq
1063 aa
AA seq
DB search
MSKDIRSFFKPQKMKKPRAEDDVDVIPESPDVAIKIKKRENRKKRVLSDSDEEIFSTKKK
KSNEDSHKTSLKSKHKALAKTELKEVKAADIFGSGPIKRTEPNVKSVQKKTETGIHSDDD
FDKSLLELDSTEELALNNVKKETIPVKSPNDKSNITPNSTKTNTDIKKNKSLEMNTFNGN
GSLSAENHESEAVSPKAKKGHLDLASGNTYESKQNIITKSKSKASNSTNENASPNDKDIF
EATDFELDSSQVKSNKKLEKSLNESVVTDEERYERKRHSAALYQKYLNRCGPKHLGARTI
PEGTPNCLKDCAFLLTGVLDSFERDEVAEAITKLGGTIKNSISKKVTHVLAGEDAGPAKI
AKARDLGIKIINENEFLELMVALSKGNTTEKTKNKDDIKKEKNPIPKSNKEKQHTVNKNN
HKSDTSTSNQKSIKVKTSPKVKNIKRDIVDVKVKKLEADKNGNRSTEPESKPKLSTNIPE
SNIKVNSTNDLQVSSTTKPATVSVQSAMWVEKYKPQSLKQIIGQHGEASNVKKLCNWLSK
WYVNRKAKLPKPSPWAKNDDGGYYKAALLSGPPGVGKTTTVTLVCKELGFDVVEFNASDT
RNKSLIKEQISELLTTTSLSGYAKGMMGKQAVSKKHVLVMDEVDGMAGNEDRGGLQELIS
LIKSASVPIICMCNDRTTQKMRSLLNYCYDLRFSRPRVDQIKAAMMSVCCKEGIKVSGEA
LSQLIVAANQDVRQTLNLLSMWAVDRGRADADTLVRDASQTKKDIKLGPWEAIRKVFSAE
EHKSMSIHDKSDLFFYDYSLAPLFVQENYLQVAPHCPKHEVLERVSRAADSISVGDLVEA
RIRGTHACWTLLPMQAMYSSVIPGHSMAGHVTGQIQFPGWLGKNSRKNKMHRLCQEIHAH
TRLSTSGSKSSIFLDYCTHLRDAIVTPLIRNKNDGIAHSLEVLEAYHLLRDDLESLTEMS
LWPGQRNPMILIDSKVKAAMTRTYNKKAMALPYAPGQVKRARAVDATVAPANDDDHDDED
DSDPENDLLIKKKKNNEKTGGKKDEAGTIKDNASSSKGKTKKT
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggatattcgatcgttttttaagccccagaaaatgaaaaaaccaagagcagaa
gatgatgttgacgttataccagaatctcctgatgtggcaattaagatcaagaagagagaa
aatagaaagaaacgagtgttgagtgactcggatgaagaaatattttctacaaagaagaaa
aagtcaaatgaagatagtcataagacatcgctgaaatccaaacataaggcccttgctaaa
acagaactgaaagaagttaaagcagctgacatctttggcagtggacccattaaaagaaca
gagccaaatgtaaaatcagtccaaaagaaaactgaaactggtattcattcagatgatgat
tttgataaaagccttttggaacttgatagtactgaagaattagctctgaataatgttaaa
aaggaaactatccctgttaagtctcccaatgacaaatcaaacattaccccaaattcaaca
aaaactaatactgatatcaaaaaaaacaaatcgctggaaatgaacacttttaatggaaat
gggagtttgtctgcagaaaaccatgaatcagaagccgtttcaccaaaagcaaaaaagggg
caccttgatttagcatcagggaatacatatgaatcaaagcaaaatataatcaccaaatca
aagtcaaaggcgagtaatagtactaatgagaatgcatctccaaatgataaagatattttt
gaagcaacagacttcgaactagattcaagccaagtaaaaagcaataagaaacttgagaag
agcctaaatgagtctgttgttactgatgaagagagatatgaacgtaaacgacattctgca
gctttgtaccaaaagtatttgaacaggtgtggacctaaacatttgggagctagaaccatt
ccagagggtacaccaaattgcttaaaagattgtgcctttttgttaactggggtgttggac
tcctttgaaagagatgaggtggctgaagctattacgaaactgggtggaactatcaaaaac
tctatcagcaaaaaggtaacacacgtgttggctggagaggacgcgggtccggcgaaaata
gcgaaagctcgagacctaggaattaaaataataaatgaaaatgagtttctggaattgatg
gtggctttgtctaaaggaaacacgactgagaagacgaaaaacaaagatgatatcaaaaaa
gaaaaaaatccgattccgaaatcaaataaggaaaaacaacatacagtaaataaaaataat
cataaatctgacaccagtacaagcaatcagaaatctataaaagttaaaactagcccaaaa
gttaaaaacatcaaaagagacattgtagatgtaaaagtaaaaaaattggaagctgataaa
aatggaaacaggtctactgagccagaaagtaaacccaaattaagtactaatatacctgaa
agtaatataaaagtgaattctactaatgatttacaggtcagctcaactacaaaaccggca
actgtttccgtgcagtctgcaatgtgggtggaaaaatataaaccacaatcactcaaacaa
attattggtcaacatggggaagctagcaacgttaaaaaattatgcaactggctttctaaa
tggtatgtaaatagaaaagcgaaattaccaaagcctagtccgtgggcgaaaaacgatgac
ggaggatattataaagcagctttgctgtcgggacctccgggcgttggtaagacgacgacg
gtgacattggtgtgcaaagagctcgggttcgacgtggtggagtttaatgcctccgacacc
aggaacaagtccctaataaaggaacagatcagcgagttgttgaccactacatccctttcc
gggtatgccaagggaatgatgggcaagcaagctgtttcaaagaaacatgttttagtaatg
gacgaagttgacggtatggctggcaacgaagatagaggcggtctccaagagttgataagt
ctcataaagtcagcatccgtacctatcatatgcatgtgcaatgatagaaccactcagaaa
atgagatctctcctcaattattgctacgatttgagatttagcaggcctcgagttgatcaa
ataaaggcggcgatgatgtcggtgtgctgcaaggagggcatcaaagtgtccggcgaggcg
ctgtcacagctgatcgtggccgccaaccaggacgtgcgccagacgctcaacctgctctcc
atgtgggccgtggaccgcggccgcgccgacgccgacaccctcgtgagagacgcctcgcaa
actaaaaaggatatcaaactggggccttgggaagccatacgcaaggtgttctctgcggaa
gaacataagagcatgagcattcacgacaaaagtgatctgttcttctacgactacagcctc
gcgccgctgttcgtgcaggagaactacctgcaagtcgcgccacactgccccaagcatgag
gtgctggagcgggtcagcagggcagccgacagcatcagcgtgggagacctcgtcgaggcg
agaattcgcggcacccacgcctgctggacccttttgcctatgcaggcgatgtacagctca
gtgatccccgggcactcgatggcgggccacgtcaccggccagatacagttcccgggctgg
ctcggcaaaaactcgcgcaagaacaagatgcaccgtctctgccaggagatccacgcgcac
accaggctgagcacatctggttcgaagtcgtccatattcctggactactgcacgcacctg
cgcgacgccatagtgacgcctctcatccgaaacaagaacgacggcatcgcgcactccttg
gaagtactcgaggcgtaccatctcttaagagacgatttggaatccttgactgaaatgtca
ctatggccaggccaaaggaatccaatgattcttatagattcgaaggtaaaagcggcaatg
acccgcacatataacaagaaagcgatggcgctgccgtacgcgccggggcaggtgaagcgc
gcgcgcgccgtcgacgccaccgtcgcgcccgccaacgacgacgatcacgacgacgaagat
gacagcgaccccgagaatgaccttctcattaagaaaaaaaagaacaatgagaaaaccgga
ggtaaaaaagatgaagctggtacaataaaagacaacgctagctcgagcaaaggcaagaca
aagaagacgtag
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