Cydia strobilella (spruce-seed moth): 134754240
Help
Entry
134754240 CDS
T10503
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134754240
mRNA degradation factors
3'-5' decay
Pan complex
134754240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134754240
NCBI-ProteinID:
XP_063546495
LinkDB
All DBs
Position
Z:7237260..7270642
Genome browser
AA seq
669 aa
AA seq
DB search
MDPSIFLQYSPPNGLPQESKLATYMTLQNGPVPQYTTHYVPHLSIYPIVRREEVEEAEEL
ERDLRNRSTSTPTRSLNQAMGKLSLESSPTAIKKPFPQVLIGEFMPVNYFTPFLPESPES
SPPSTLANLQGNLQGNLQGNLQGNITGNIQQNTQQVHQENVGGTTYFYSTNDSMNSTGGL
NASASMGQPEQCLGVVGPGPVVPSPYATQMYAGTPTHMGPITQTKPGLAATFYMPETIRQ
EIYQRNEEVFLQTDLRQFPDLPENVEMYSELTPIECTPHSLATSYRATHRQSGEHYALRR
LHSYSNVATKRLEMWKHIDHPNVVRFHECFTTKAFGDHSMVLVYDYHPACVTVMNQYLSG
GSSAPGEGNTFHDPFSSDPDAPRPYTHQKNAMLRAVACGALLPEAVLWSLLVQLTAALRA
IHTAGLACRNLDPTKVVMNGCRVRVAWCGVADVLHTNTNDVGQAQQEDLTALGRLALALA
CRTVHCDNLPASMDLVARTYSADLKNFILYLLSTSPARRSVTDLMPMIGARFYTQVEALE
RRADAFEEQVAQEIDNGRLLRILIKLGVVNERPELNMDPAWSETGDRYMLKLFRDYLFHS
VGADGRPWLDYAHLAHSLNQLDGGSSNQVELMSRDEQSVLVVSYAELKHCLEQSFEEVTQ
AASSSHLAN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctatctttttgcaatattctcccccaaatgggcttccccaggaatcaaaa
ctagcgacgtatatgacccttcagaatggacccgttccacaatacacaacacattacgta
ccacatctgtctatctaccccattgttagaagagaggaagttgaagaggcggaggaatta
gagagagatttacggaaccgttctacgtcaacccccacaaggtccctgaaccaggcaatg
ggcaagctgagtttggagtcttctcctacagccattaaaaaaccattcccgcaggtcctc
ataggggagttcatgcccgtgaactatttcacgccattcctccccgaatccccggagagc
tcgcccccatccaccctggctaatctccaggggaacctccagggaaacctccaggggaat
ctccagggaaatattacaggcaacatacagcaaaatacccagcaagtacatcaggagaat
gttggcggcacgacgtacttttattccacaaacgacagcatgaactcgaccggcggactc
aatgcttctgcatctatgggccagccggagcaatgcctaggcgtggtgggtccggggccg
gtggtgccctctccgtacgcgacgcagatgtacgcaggcacacctacacacatgggaccc
ataacgcagaccaagcctggcctcgcagcgacattctacatgccagagaccattcgccag
gagatctaccagcggaatgaagaggtgttcctgcagacggatctgcgccagttccctgat
ctaccagagaatgtcgagatgtactcagagctgacgccgatcgaatgcaccccgcactct
ctagccacatcctaccgcgccacgcatcgccagagcggcgaacactacgctctgcgccgt
ctgcattcgtactcgaacgtggccaccaagcggctcgaaatgtggaagcatatcgaccac
cctaacgtcgtgcggtttcatgagtgcttcaccaccaaggcgttcggtgatcactcaatg
gtgttagtatacgactaccacccggcctgcgtgaccgttatgaaccagtacctctccggc
ggaagctcggcccccggcgaagggaacaccttccacgatccgttcagctcagacccggac
gcgccgcgcccctacacacaccagaaaaacgccatgttgcgcgcagtggcgtgcggcgca
ctgctcccagaggcggtgctctggagtctactagtgcagctgacggccgctctgcgcgcc
atacacaccgccggactagcttgcagaaacctggacccgactaaagtggtgatgaacggg
tgtcgagtgcgcgtggcctggtgcggcgtcgcggacgtgctgcacactaacaccaacgac
gtgggacaggcgcaacaagaggacctcacggcgctaggacgcctcgcgctggcgctggcg
tgccgcacggtgcactgcgacaacctgcccgcctccatggacctggtcgcgcgcacctac
tccgccgatctcaagaacttcatactgtatttgctgtcgacgtcgcccgcccggcgttcc
gtcacggatctcatgcccatgatcggagccagattctacacacaggtggaggcgctggag
agacgggcggacgcgttcgaggagcaggtcgcgcaggagatcgacaacggtcgtctcctg
cgcatactgatcaagctgggcgtcgtcaacgaacggcccgaactgaacatggacccagcc
tggtcagagaccggcgaccgctacatgctgaagctgttccgcgactacctgttccactcg
gtcggcgcggacggccggccgtggctcgactacgcacatctggcgcactcactcaaccag
ctggacggaggctcctccaaccaggtggaactgatgtctcgagacgagcagagcgtgctc
gtggtgtcgtacgcggagctgaagcactgcctggaacagtccttcgaggaggtgacccag
gccgcttccagctcgcacctcgccaactaa
DBGET
integrated database retrieval system
