Cydia strobilella (spruce-seed moth): 134754771
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Entry
134754771 CDS
T10503
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134754771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstb03021
]
134754771
03036 Chromosome and associated proteins [BR:
cstb03036
]
134754771
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134754771
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
134754771
Chromatin remodeling factors
BAF complex
134754771
PBAF complex
134754771
GBAF(ncBAF) complex
134754771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
BRK
SnAC
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
134754771
NCBI-ProteinID:
XP_063547198
LinkDB
All DBs
Position
Z:53218375..53249578
Genome browser
AA seq
1666 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPTQSPAPPQSPHSPYNQQHVNGPPTPHQAGAPQGQMSN
HMSPGPASNSNGPPQQHPSMPPNSHQMPPHMVGGHMGSPGHAMPTGSHPSGPNGLAMPGG
AQHPNMAGQGPPHGYMQHQIGHMAPGQAPMAMGGGAPPPGNGPAGPAGVPLPPHGLPAGA
PGHMPHHALMAGQGPPPHTPAPGYSAHGPAAPGTPPNQPSHAQPPAPPQHPPSAQTPPHQ
SAPPSTSSNGASSSSPMQGSMATPGPDNLHALQRAIDSMEEKGLQEDPRYSQLLALRARS
NAQDPSKGLFSNSQLSQLKAQIAAYRNLARNQPVSQQISLMAAGKRTGDTPPECPTPPAQ
PPSPYSQQGQGQGQPAGKGASGDTARGGGGAPPTPLPMTGQMAPPTQPTPPLVNPPMGQG
APRGAAPVRPPGPGSAAAPTSQQPGAPTPGAKQNRITSIPKPVGLDPLQILNERENRIAA
RIAHRMDVLSNLPANISDDLRLQAQIELRALRVLNFQKQLRAEILGQVRRDTTLETAVNI
KAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYHRNNQAK
LSRMNKAIMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQ
TDEYIASLTEMVKQHKQEQRKKQQEEERRKRKSRKKKLLEGGEIDAMDDSSQTSDSRVSV
MDPKTGEVLKGEEAPLLSQLKDWMETHPGWEVLSDSEDSGDDSQDDEKRRDRHHEKSDKE
KTDEERAREMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQSSILVNGNLKEYQIKGLE
WLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFE
KWAPTVVVVSYKGSPQSRRLVQNQMRSTKFNVLLTTYEYVIKDKGWLSKLQWKYMIIDEG
HRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWF
NAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGL
QRVLYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKFCDHI
GTGGGVVSGPDLYRVSGKFELLDRILPKLKQTGHRVLVFCQMTQCMTIIEDYLSWRAFQY
LRLDGMTKAEDRGDLLKKFNDVDSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD
LQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER
QQFLQSILHQDGDDEEEENELPDDDLINEMIARSEEELEIFKQIDIERRKTETQTRLIEE
SELPDWLVKNDDEVVCNKGQNWSFIDEDEIRGRGTRQRKEVDYTDSLTEKEWLKAIDDEF
DEEEEDEDDDEVLDKKRKKGRKRRRQEDSDEEDAPSSSKKKNKTETNQLKKTLKNVMKKV
IDYTDESGRVLSEPFMKLPSRRELPDYYDIIKKPLDIKKILNRIEDGKYNELADLERDFF
TLCSNAQAYNDDLSLIYADSVRLRTAFIEIRRRCDAGQLSEDSEDEKGTPDEAPSGAAAE
EEEESDEESSRSVKMKIKLKGKSKGTPGRKRKPRKYISDDEDFEVD
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggctagtccgtctcctcagagcagtccaatgcccccgccacaggctccaagtcctatg
gggccgcctacgcaaagcccggcgcctcctcagtcgcctcacagcccgtacaaccagcag
catgtgaacgggccgccgacaccgcatcaagcgggagctcctcagggtcagatgtcgaac
cacatgtcgcccgggccggcgtctaactcgaacgggcccccacagcaacatcccagcatg
ccgccaaactcgcatcagatgccgcctcatatggttggagggcatatgggcagtccggga
cacgccatgcccactggctcgcatccctctggtcctaatggcttggccatgccaggtgga
gcacagcatcccaacatggccgggcaaggcccaccccatggatatatgcagcatcaaatt
ggacatatggctccagggcaggccccaatggcaatgggcggaggcgctcctccgccgggc
aacggtcccgcgggccccgcgggcgtgccactgccgccccacgggctgccggccggtgcg
cccggccatatgccacaccacgccctcatggccggccagggtccgccgccgcacacgccc
gcgcccggttactcggcgcacgggcccgccgcgcccggcacgccgcccaaccagccgtcg
cacgcgcagccacccgccccgccgcagcacccgccatcggcgcagacccctccgcaccag
agcgctccgccctccacctcctccaacggcgcgtcgtcctcctcgcctatgcaaggctcc
atggcgacaccgggtccggacaaccttcacgcgctgcagcgggccatcgattctatggaa
gagaaggggctgcaggaagacccgcgatactcgcagcttctagctcttagagcgagatct
aacgcccaggaccctagcaagggtctgttctctaacagccagcttagccaactcaaggct
cagatagccgcatacagaaatctggctcgcaaccagcccgtgtcgcagcagatatccctc
atggcagcaggcaagcgcaccggggacacgccgccagagtgccccacgccaccggcgcag
ccgccgtcgccgtacagccagcaagggcagggccagggacagcccgcgggcaagggcgcg
tcgggcgataccgcgcggggaggcggaggggcaccaccgacgccgttgcctatgacgggg
caaatggcgccgcctactcaacctacaccgccgcttgttaacccgccaatgggacaagga
gcgcctcgcggcgcggcgccagtcagaccgccaggcccaggcagcgctgctgctcccacc
agtcagcagccgggtgcgcctactcctggtgcgaaacagaatcgcatcacaagcataccc
aagcccgtgggactcgaccccttacaaattcttaacgaaagagaaaacagaattgccgct
cgtattgcacatcggatggacgtgttgtccaacttgccggccaacatatcggatgacctg
cggctgcaggcgcagatcgagctcagagcgctgcgcgtgctcaactttcagaagcaactg
agggctgagatcctcggccaggtccggcgcgacacaacgttggagacggctgttaacata
aaggcgtacaagcgcaccaagcgtcaggggctgcgcgaggcgcgcgccacggagaagctg
gagaaacagcagaagctcgaagccgagcgcaagcgtcgccagaaacaccaggagttcttg
cagaccgtactgcagcatgccaaagacttcaaggagtatcaccgcaacaaccaagccaaa
ctgtctcgcatgaacaaggccatcatgaactaccacgccaacgccgagcgcgagcagaag
aaggaacaggagcgcatagagaaggagcgtatgagacgtttgatggcggaggacgaggag
ggctaccgcaagctcatcgaccagaagaaagacaagcgtctcgcgttcctgctgtcgcag
accgacgagtacatcgccagtctcacggagatggtcaagcagcacaaacaagagcagaga
aagaagcagcaagaagaagagcgcaggaagcggaaatcgcgaaagaaaaagttactggag
ggcggtgagatcgacgcgatggatgacagctcgcagacatccgactccagggtcagcgtc
atggaccccaagaccggcgaggtactgaaaggcgaagaggcgccgctgttatcgcagctg
aaggactggatggagacgcaccccggctgggaggtgctctccgactccgaggactctggc
gatgatagccaggatgacgagaaacggagggacaggcaccacgaaaagagcgacaaggag
aagacagatgaagagagggcgcgcgaaatgatcaagaaggccaaggtcgaggacgacgag
tacaagacggaggaacagacttactacagcatcgcgcacacggttcacgagtctgtcacg
gagcaatccagtatcctggtcaacggcaacctgaaggagtatcagatcaagggtttggag
tggctggtgtcgctattcaacaacaacctgaacggcatcctcgccgacgagatgggtctc
ggcaagaccatccagaccatcgcgctggtcacctacttgatggagaagaagaaagttaac
gggcccttcctcatcattgtaccgctcagtactctatcgaactgggtgctcgagttcgag
aagtgggcgccaacagtggtggtggtgtcgtacaagggctcgccgcagtcgcggcggctc
gtgcagaaccagatgcgctccaccaagttcaacgtgctgctcaccacctacgagtacgtc
atcaaggacaagggctggctgtccaagctccagtggaagtacatgataatcgacgagggt
caccgcatgaagaaccaccactgcaagctgacgcaggtgctgaacacgcactacatcgcg
ccgcaccgcctgctgctcacgggcacgccgctgcagaacaagctgcccgagctgtgggcg
ctgctcaacttcctgctgccctccatcttcaagagctgctcgaccttcgaacagtggttc
aatgcgcccttcgctactaccggagagaaggtggaactgaacgaggaagaaacgatcctc
atcatccgtcgtctgcacaaggtgctgcgtcccttcttgctgcgaaggctgaagaaggaa
gtggagagccagctgcccgacaaggtggaatacatcataaagtgcgacatgagcggccta
cagcgggtcttgtacaaacacatgcagtcgaagggcgtgctgctcacggacggctcggag
aagggcaacaagggcaagggcggcgccaaggcgctcatgaacaccatcgtgcagctgcgc
aagctctgcaaccaccccttcatgttccagcacatcgaggagaagttctgcgaccacatc
ggtaccggcggcggtgttgtgtctgggcctgatctataccgcgtgtcgggcaagtttgag
ttgctggaccgcatcctgccgaagctgaagcagaccgggcacagggtgctggtgttctgt
cagatgacgcagtgcatgactatcatcgaggactacctgtcgtggagagccttccagtac
ttacggttggacggtatgacgaaggcggaggaccgcggcgacctgctgaagaagttcaac
gacgtggactcggagtacttcatcttcctgctgtcgacgcgcgcgggcgggctcggcctc
aacttgcagagcgccgacaccgtcatcatcttcgacagcgattggaatccacatcaggac
ttgcaagctcaggatcgtgcgcatcgtataggacagcggaacgaagtgcgagtgctgcgg
ctcatgaccgtgaactctgttgaagagagaatcctagctgctgcaaggtacaagttgaac
atggacgagaaggtcatccaggctggtatgttcgatcagaagtcgacgggctccgagcgg
cagcagttccttcagagcattctgcaccaggacggtgacgatgaggaggaggagaacgag
ttgccagacgacgacctgatcaacgagatgatagcccgctcggaagaggagctggagata
ttcaagcagatcgacatcgagcggcgcaagacggagacgcagacgcggctcatagaagag
tccgagctacccgactggctggtcaagaatgacgacgaggtcgtctgcaacaagggccaa
aactggagcttcatcgacgaagacgagatacgggggcgcggcaccagacaacgtaaggag
gtggactacacggactcgctgacggagaaggagtggcttaaggccatcgacgacgagttc
gacgaggaggaggaggacgaggacgatgacgaggtgctcgacaagaagcggaagaagggc
cgcaagcgacgccgtcaagaggactctgacgaggaggacgcgccgagctcatccaaaaag
aagaacaaaacagagaccaaccagctcaagaagacgcttaagaacgtcatgaagaaagtc
attgactatactgacgaatcgggtcgcgtcctgtccgagccgttcatgaagctgccgtcg
cggcgcgagctgccagactactacgacatcatcaagaaaccgctcgacatcaagaagatc
cttaacaggattgaggatggaaagtacaatgagctggccgacctggagcgcgacttcttc
acgctgtgctccaacgcgcaggcgtacaacgacgacttgtcgctgatttacgccgactcg
gtgcggctgcgcaccgccttcatcgagatccggcgccgctgcgacgccggccagctgtcg
gaggactcggaggacgagaaaggtacgccagacgaagctccgtcgggtgcagcggcagaa
gaggaagaggaatcagacgaggagtcgagccgctccgtcaaaatgaagatcaagttgaag
ggcaagagcaagggcacgccaggccgtaagcggaagccgcgcaagtacatctccgacgac
gaggactttgaagtggactag
DBGET
integrated database retrieval system
