Cydia strobilella (spruce-seed moth): 134754903
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Entry
134754903 CDS
T10503
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03030
DNA replication
cstb03410
Base excision repair
cstb03420
Nucleotide excision repair
cstb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134754903
03410 Base excision repair
134754903
03420 Nucleotide excision repair
134754903
03430 Mismatch repair
134754903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cstb03032
]
134754903
03036 Chromosome and associated proteins [BR:
cstb03036
]
134754903
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134754903
DNA replication proteins [BR:
cstb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
134754903
DNA Replication Termination Factors
ELG1-RFC complex
134754903
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
134754903
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
134754903
Check point factors
HRAD17(Rad24)-RFC complex
134754903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
RCF1-5-like_lid
AAA_30
AAA_16
AAA_22
Gp44_lid
Mg_chelatase
AAA_24
AAA_11
RuvB_N
Rad17
bpMoxR
SLFN-g3_helicase
AAA_lid_RFC1
AAA_19
AAA_28
AAA_3
nSTAND_NTPase5
AAA_5
Effector_1
DUF815
AAA_assoc_2
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
134754903
NCBI-ProteinID:
XP_063547445
LinkDB
All DBs
Position
Z:complement(41156915..41190846)
Genome browser
AA seq
350 aa
AA seq
DB search
MQAFLKTGKISGSAKLTPSGTKPTKKKPPAPWVEKYRPKTIEDIVDQGEVVQVLRECLSG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDISRDRVLELNASDERGIQVIRDKVKSFAQL
TVSATRTDGRTCPPYKLVILDEADSMTTAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIMRLRDICASEGVEIGDGSVLEQAVGTCEGDLRRALTALQCC
QRLLGEVTAEGLVEVTGLVPEKLVNEYLAIKNYGELEQFVDNFLMEAYSASQLLEQVSAA
VVCAGHLTNRQKVRISEKLAGCAHRLQDGGAEAMQLTDLGCAVIMANNDP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctcaaaactgggaaaatatcaggctcagctaagctgacgccgtcgggc
accaaaccaacaaagaagaaaccgccggcaccatgggtcgagaaataccgtccaaaaacg
attgaggacatcgtagatcagggcgaggtagttcaagtgttgagagaatgcttgtcgggc
ggtgatctgccgcacctgctgttctatgggccgccgggcacgggaaagacgagcgccatc
ctggcggcggcgcggcagctgttcggcgacatctcgcgcgaccgcgtgctggagctgaac
gcgtccgacgagcgcggcatacaggtcatccgggacaaagtcaagtcatttgcacaactc
acagtcagcgccaccaggacagatggaaggacgtgccctccatacaagctggtgatactg
gacgaggcggactccatgaccaccgccgcgcaggcggcgctccgccgcactatggagcgc
gagacgcgcacgacacgcttctgtctaatctgcaactacgtgtctcgtatcattccaccg
atcacgagtcgctgctccaagttcagatttaagccgctggcgagagaaaatgttataatg
aggctgcgagatatctgcgcgtcggagggcgtggagatcggggacgggtcggtgctggag
caggcggtgggcacgtgcgagggcgacctgcgccgcgcgcttaccgcgctgcagtgctgc
cagcgcctgctcggggaggtcacggccgaggggctcgtcgaggtgactggtttggtaccg
gagaaactagtcaacgagtacctggctatcaagaactacggggaactggaacagtttgtt
gacaatttcctaatggaagcgtattcggcatcgcagctgctggagcaggtgtcggcagcg
gtggtgtgcgccgggcacctgaccaaccggcagaaggtgcgcatcagcgagaagctggcg
gggtgcgcacaccgcctgcaggacggcggcgccgaggccatgcagctcaccgacctgggc
tgcgccgtcatcatggccaacaacgacccctga
DBGET
integrated database retrieval system
