Cydia strobilella (spruce-seed moth): 134755223
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Entry
134755223 CDS
T10503
Name
(RefSeq) receptor-mediated endocytosis protein 6 homolog
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cstb04131
]
134755223
Membrane trafficking [BR:
cstb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134755223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
KCTD1-15_CTD
XhlA
Motif
Other DBs
NCBI-GeneID:
134755223
NCBI-ProteinID:
XP_063547817
LinkDB
All DBs
Position
Z:complement(58350909..58412280)
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AA seq
1606 aa
AA seq
DB search
MMQSTTDDCLNIAELANQLTREKIFISSERQLLQNLNEEVEKSALELLQAAWICSQQRQN
LTDLINSRCEADSVAACQRVSSLEGTTFVDIYKVLKYKEALALGELLGWLRDSPHLVSLC
LLLGEEHMPPTLPCALVAGLYGSCRLPADRTRLLAVIRSLLKHQLATSGDPRKLFRSGKC
ALASLYGVFRDGHAPARQFLVAALNAPVMAALHEDEFFLDIHPDRAMERFSPQDRVKKFG
QSNTAEYNAKVARYRKWIVQRLFQLTNKFITSLREHWANFPASIAWLIQQSVHLIKQHSR
IPESELHGVCTDLVLNHFICPAILNPEAHGVVDAPVSYIARTNLMQIAQILQVLCLSKHN
EVDSKLTDLYSLFPRSCVWALVDGVCGDALAPRAPAPPADAAAPRTDAPCAPATALYSHQ
DLHHLITFLKRISSKLNNNTPSVTSEEMSSGSGPADATAYSSESGSDTSTSDACASSLAA
LLQTMEPNYRSRLHDLLRKMPDLSKPRQSPPQPADAAETQKKSILAKVPKPRLPRSGSSN
TSLATDTPEPEPEVYVIQMARQDESDYVGLVPESKVLECYCGGSEGDAEDAGSALAAAPG
APVQKRTRFSVSHDEVSLGNTSDNLEAVSEAASNHSVTSSLELETEDQNDNLSDMVSANV
SGRGSPNISGRETPSSQVTDGDAAGEPARRLPQNVPVSQANSAQAKLLKQTRNDIEDKFC
KFEIKKLLEGDETVSIMSDTWSTDVLASDSETIGDTCDHTLVAVNQNVVANTNAPDVSET
ASESAWSMDVLASDSDRNTEVDTDDCVSVAARSDTSWPRRLSQQEEQVAIKQNQQNGAYK
KAEVSNSPKHTPRPYQPNRSGSGYLSATAQLSRGAELDLVSTAAPMYPENRKSILVNGYP
VMTCYATSAPESPGAAAPAPLPNLFDYNPQNGESSQSESTLEGAANSQSDATSQWVDDSF
PPPHHSSKRPFPLCKYDMPSTSKTYDENDIMDRSLNSSESSFNALSVSQYDRRFDSGIDT
ERNEDRSAITDLMTRMSSATISTSANLVNNVSRIVKSEIRTSIVSISSSRIEKKRDTSNM
SLSTLSVNSETSVSDRSSSQDVNSENVTERRVSPPAVKPASTGAIPKSISFDATAEKSQR
RRITEDSLVGNLDELKNNVKRSGGNLLHKIKMFSRPKGRSHQHPNDIKLAEEEALREDAP
RAEPAESSDDILAKYRRKSSGDSRRRGQRRVSDVPDIADRCEGVLDLNDPEVFNSMKKKL
RLVLSNPELLCTEYVPNRCTSTSLVEWMRAAAAAASETGASAQAAEVARALAASGARCER
LAAALRADLDARRPYAKYLASCRAALTHTLHALRRQTNQVRAECSACARAAAAARVLQQL
ERGNSLRRLARHHSAHNNHATVNGGELMDEKAKRLMANIKTLIAEVKADPSWEGAPATSI
EVLELTVERAAFARLYLNVLFPIGEGDYGRDQVVSEHIRRLGAGMTASRAGVSARHLWAA
PYARAQLLLTQLPVYRTPRDKLQCVMRCVTCVMAVLGLTEGSAPSADDLTPVLVFIILKV
NPPSLLSTIDFVNTLGGAALQGPALYWWTHFCSAVAYIKTMEYGDS
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtcgacgacagatgattgcttaaatatcgccgagttggccaaccagctgact
cgagagaagatatttataagttcagaaaggcagttgctgcaaaaccttaacgaggaagtg
gagaagagtgccttagaattgctacaggctgcctggatatgctctcaacaacgacagaat
ctcacggacctgataaactctcggtgcgaggctgactcggtcgcggcctgccagagagtc
agctcactcgaaggtacaaccttcgtagacatatacaaagtactaaaatacaaggaagcc
ttagccctcggcgaactgctaggatggctgcgcgactccccccacctcgtctccctctgc
cttctcctgggggaagaacacatgccccccactctaccgtgcgcgctggtggccgggttg
tacggcagctgccgtcttccggccgaccggacgcggctgctggccgtgatacggtcgctg
ctgaaacaccagctggccacgtctggcgatcctcggaaattgttccgctccggcaaatgc
gcgctggcgtcgttatacggcgtgttccgagacgggcacgcgccggcgcggcagttcctg
gtggcggcgctcaacgcgcccgtcatggcggcgctgcacgaggacgagttctttctggac
atccaccccgaccgcgccatggagcgattctcaccccaagatcgcgtaaagaaattcggc
cagtccaacacagcggaatacaacgctaaagtagcgcgctatcgcaaatggatcgtgcag
cgtctgtttcaacttaccaacaaattcattacgtcgttgcgggaacattgggctaacttc
cctgcatctatagcgtggctgatacagcagagcgtccatctcatcaaacaacactcgcga
ataccagagagcgagctgcacggcgtatgcacggatctcgtgctcaaccacttcatctgc
cccgcgatcctgaatcccgaggcgcacggcgtggtcgatgcgcccgtgtcgtacatagcg
cgcactaatctcatgcagatcgcgcaaattctgcaggttctgtgcctcagcaagcacaat
gaggtggactctaaactgacggacctgtactcgctgttcccccgctcgtgcgtgtgggcg
ctggtggacggcgtgtgcggggacgcgctggcgccccgcgcgcccgcgccccccgccgac
gcggccgccccccgcaccgacgcgccgtgcgcgcccgccaccgcgctctactcgcaccag
gacctgcatcaccttataacattcctgaagcgaatatcctcaaagctgaacaacaatacg
ccgagcgtgacgtcagaggagatgtccagcggctcggggcccgccgacgctactgcttat
agcagtgaatctggcagcgacacatccacctcagacgcctgcgcgtccagcctggcagcc
ctcctccagaccatggagcccaactaccgcagcaggctgcacgacctgctcaggaagatg
ccggacttgagcaagccgagacaatctccgcctcaacccgcagacgcggcagagacgcaa
aagaagagtattctggcgaaagtgcctaaacctcggttgcctcgcagcggcagttcgaac
acgtcactcgcgaccgacaccccggaacccgaacccgaggtgtacgtcatacagatggct
cgtcaggatgagagcgactacgtcggtctggtgcccgagtcgaaggtgcttgagtgttac
tgcgggggctcggagggcgacgcggaggacgcgggctccgcgctggcggccgctccaggc
gcccccgtgcagaaacggacgagattttcagtgtctcacgatgaggtgtcgttaggcaac
acgtcggataacttggaagcagtgtcggaggcagcctccaaccacagcgtgacttccagc
ttggagctggagacggaagaccagaacgataatctgtccgatatggtatcggccaacgtt
agcggccgcggcagccccaacatctctggtcgtgagacgccatcttcccaagtcacagac
ggagacgcggcgggcgagccggctagacggttgccgcaaaacgtgcccgtcagccaggcg
aacagcgcgcaggccaagctgctcaagcaaaccaggaacgatatagaggacaagttctgc
aaattcgagatcaagaaactcctggaaggcgacgaaactgtcagcattatgtctgacacg
tggagcactgacgtgcttgcttctgactcggagaccatcggcgacacctgcgaccacacg
ctggtcgccgttaatcaaaacgtagtggcgaacacgaatgcgccggacgtgtccgaaacg
gcgagcgagtccgcgtggtctatggacgttctcgcgtcggacagcgatcgaaacacagag
gtggacacggacgactgcgtgtcggtcgcggcacgttcagacacgtcttggccgcggagg
ctttcgcagcaggaggaacaggtggcgatcaaacaaaatcagcagaacggcgcgtacaaa
aaagcagaagtgagcaacagtccgaagcatacgccgcgtccctaccaaccgaacaggtcc
ggcagcggatacctaagcgccacagcgcaactatcgcgcggcgcggagctggacctagtt
tccaccgccgcacccatgtacccagagaacaggaaaagcatactcgtcaatggatatccc
gtgatgacttgctacgcgacgtcggcgcccgagagccccggggccgccgcgccggcgccc
ctgcccaacttattcgactacaatccgcagaacggcgaatccagccaatcagagtccacg
ctggaaggcgcggccaacagccagtcagacgcgaccagccaatgggtggacgactcgttc
ccccctccccaccactcgtccaagcggccattccccctctgcaagtacgacatgcccagc
acgtccaagacttacgatgaaaacgatattatggacagatctctaaactccagcgagagc
tctttcaacgctctctccgtctcccaatacgaccgccgcttcgactctggcatcgacacg
gaacgcaacgaggaccgttcggccatcaccgaccttatgaccaggatgtcgtccgccacc
atatccacctctgcgaacctggtcaacaatgtgtctaggattgtgaaatcggagatacgg
accagtatagtcagcatatcgtcttccaggatcgaaaagaagcgcgatacatcgaacatg
tccctaagcacgctgtcagtcaacagcgaaacgtcagtgtccgaccgcagttcgagccaa
gacgtcaactccgagaacgtgacggagcggcgagtcagccccccggccgtcaaacccgcg
tccaccggagccatacctaaaagtatcagcttcgatgctaccgctgaaaagagtcaaaga
cggcgcataaccgaagacagtctcgtgggaaacctggacgagttgaaaaacaacgtgaaa
cgctctggcggcaacctgctgcacaagatcaagatgttcagccggcccaagggccgctcg
caccagcacccgaacgacataaaactagccgaagaagaagcgctccgcgaggacgctccg
cgcgccgagcccgccgagagctccgacgacatcctcgccaagtaccggcgcaagagctcc
ggggactcgcggcgacggggacagcggcgcgtgtccgacgtgcccgacatcgcggacaga
tgcgaaggagtactggacctcaacgaccccgaggtgtttaacagcatgaagaagaaactg
cgactcgtgctctccaaccctgaactgttgtgtacagaatacgtgcccaatcgctgcaca
agcacatccctagtggagtggatgcgagccgccgccgcggccgcctccgaaaccggcgcg
tccgctcaagcggcagaagtggctcgagccttagcggcgtcgggcgctcgctgcgagcga
ctagcggcagctttgcgggcagatctagatgcaagacggccgtatgccaagtacttggct
agctgccgggctgcgttgacgcatacgcttcacgctctcagacgacaaaccaaccaagtc
cgcgcagaatgttcggcgtgcgcgcgcgccgccgcggccgcgcgggtgctgcagcagctg
gagcgcggcaactcgctgcggcggctggcgcgccaccactccgctcacaacaaccacgcc
accgtcaatggaggagagctgatggacgagaaggcgaaaagattgatggcgaatattaaa
accctcatcgccgaagtcaaggcggatccctcatgggaaggagcgccggcaacatcaata
gaagtgctggagttgaccgtcgagcgcgccgcgttcgcacgtctctacctgaacgtgctc
tttcctatcggcgagggcgattacggccgcgaccaagtggtgtcggagcacatacgtcgg
ctcggcgcgggcatgacggcgtcgcgggcgggcgtgagcgcgcgccacctgtgggcggcg
ccgtacgcgcgcgcgcaactgctgctcacacaactgcccgtctaccggaccccgagggac
aagctgcaatgcgtcatgcggtgcgtcacatgcgtcatggcagtgctcgggctcaccgag
ggctcagcgccgtccgctgacgacctcacgcctgtcctcgtgttcattatactcaaggtc
aaccccccctcccttctctcgacgatcgatttcgtcaacacgctgggcggcgcggcgcta
cagggccctgcactctactggtggacgcacttctgttccgccgtcgcgtacatcaagacc
atggagtacggggactcctag
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