KEGG   Cydia strobilella (spruce-seed moth): 134755390
Entry
134755390         CDS       T10503                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cstb  Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:cstb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cstb03041]
    134755390
Spliceosome [BR:cstb03041]
 Complex B
  Other components
   Complex B specific factors
    134755390
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_VPS8 Ge1_WD40 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SCAP WDR54 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 DUF7165 Beta-prop_NOL10_N LisH_WDR26 LisH_PAC1 RMC1_N Dimer_MINDY4_N zf_topless
Other DBs
NCBI-GeneID: 134755390
NCBI-ProteinID: XP_063548015
LinkDB
Position
2:complement(387535..405314)
AA seq 519 aa
MSIEIESADVIRLIQQYLKESNLTRTLQTLQEETGVSLNTVESVDGFCADINSGHWDAVL
GCVAALKLPERKLVELYEQVVLELIELRELGAARQLLRNSHPCRLMKQHHTDRYIHLENL
LSRSYFDPREAYGAGGGKERRRAAIAASLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAIRDEEDDQCPTQLFKTIKFGQKSHVECARFSPDGQYLVTGSVDGLVEV
WNFTTGKIRKDLRYQAQEEYMSMEEAVLSLAFARDSDTLAAGANDGRVKVWRVSTGAVQR
RLDRAHSRGVTSLQFSRDSSQLLSASFDRTVRIHGLKSGKLLKEFRGHTSFVNEAVFTPD
GHGVLSGSSDGSVKLWALRTGECSATLKPLGAAGEAAAGAEPPVNTLLLTPKNPEHFVVC
NRTNTVVIMNTAGQTVRSFSSGRREREGGALTAAALSARGRLVYCAGEDLVLYAFCANTG
KLERTINVHEKAVIGMTHHPHQNLLATYSEDGLLKLWKP
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtctatcgaaatagaatctgcagacgtgatccggttgatccagcagtacctgaaggag
tctaatctcacgcgcacgcttcagacgctgcaggaagaaacaggtgtgtcactgaacacg
gtggagagtgtggacggattttgtgcagacatcaacagtgggcactgggatgccgtactg
ggctgcgtagcggcactaaagctgccagagcgcaagctggtggagttgtatgaacaggtg
gtcttggagctgatcgagctgcgcgagctgggcgcggcgcggcagctgctgcgcaactcg
cacccctgcagactgatgaagcagcaccacacagaccgctacatacaccttgagaacctc
ctctcccgctcgtacttcgatcctcgcgaggcgtacggcgcgggcggcggcaaggagcgg
cgccgcgccgccatcgccgcctcgctcgccggcgaggtgtccgtcgtgccgtccagccgg
ctgctggcgctgctggggcaggcgctcaagtggcagcagcaccaagggctgctcccgcca
ggcacaaccatcgacttgttccgaggcaaggccgctatccgagacgaagaagacgaccag
tgccccacgcagctgttcaagaccatcaagttcgggcagaagtcccacgtggagtgcgcc
cggttctcccctgacggccaatacctcgtcaccggctccgtggatgggctagttgaggtg
tggaacttcacgacgggcaagatccgcaaggacctccgctaccaagctcaagaggaatac
atgagcatggaggaagcagttctcagcttagcgttcgcgcgcgactccgacacgctcgcc
gccggcgccaacgacggccgcgtcaaggtgtggcgcgtatcaacgggcgcagtgcaacgc
cgcctcgaccgcgcgcactcccgcggcgtgacgtcactgcagttcagccgggactcctcc
cagctactgtcggcctccttcgaccgcaccgtgcgcatccacggactcaagtccgggaag
ttgcttaaggagttccgcggacacacgtcgtttgttaacgaggcggtgttcacccccgac
gggcacggcgtgctgtcgggcagcagcgacggctccgtgaagctgtgggcgctgcgcacc
ggcgagtgctccgccacgctcaagccgctcggcgccgcgggcgaggccgccgccggcgcc
gagccccccgtcaacacgctgctgctcacacccaagaaccccgagcattttgtcgtctgc
aaccggactaacactgtggtgataatgaacacggccgggcagacggtgcgctcgttctcg
tcggggcggcgcgagcgcgagggcggcgcgctgaccgccgccgcgctgtccgcgcgcggc
cgcctcgtctactgcgccggcgaggacctggtgctgtacgccttctgcgccaacaccggc
aagctggagcggaccatcaacgtccacgagaaggccgtgatcggcatgacgcaccatccg
caccagaacctgctggccacctacagcgaggacggcctgctcaagctctggaaaccctga

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