Cydia strobilella (spruce-seed moth): 134755642
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Entry
134755642 CDS
T10503
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03420
Nucleotide excision repair
cstb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134755642
09124 Replication and repair
03420 Nucleotide excision repair
134755642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cstb04121
]
134755642
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134755642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cstb04147
]
134755642
Ubiquitin system [BR:
cstb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
134755642
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
134755642
TCR (transcription coupled repair) factors
Cul4-CSA complex
134755642
Exosome [BR:
cstb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134755642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF2018
Cas_Cas5d
Motif
Other DBs
NCBI-GeneID:
134755642
NCBI-ProteinID:
XP_063548237
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All DBs
Position
3:2911912..2926154
Genome browser
AA seq
788 aa
AA seq
DB search
MSQSAKTPVLAEEGGNKSRKRTHNSDLCSKTDDMSASEKKSNFSLLTTNSNGAVKTTLPS
MQSKPGATTKKLIIKNFKSKPKLPENYQETTWSKLREAVVAIQTSTAIAYSLEELYQAVE
NMCSHKMASQLYVNLTNLVEAHVKANIEQFLSESMDRQVFLKRMDDCWRAHCRQMIMIRS
IFLYLDRTYVLQNPSIHSIWDMGLDLFRHHIAMNTLIQTRTVDGLLLLIERERGGDAVDI
SLLKSLLRMLSDLQIYQDAFEHKFLQATERLYAAEGQRLVRELAVPSYLAHVEKRLREEN
ERLLHYLDPSTKWQLIHTIERMLLSEHLTAILSKGLEALMDGPRHSDLTTLYNLFSRVKD
GLSELCSHFNAYIKKKGRTIVIEPERDKSMVGELLDFKEQLDHVVATCFQRNDKFLYSLR
EAFEFFINQRQNKPAELIAKFVDVKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVFEA
FYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINITYKQH
LAGTPDTSGLELSVYILTMGFWPTYGTAEARLPAALTRQQDHFTKFYLGKHSGRKLTWQP
MLGHCVLRAHFAQGNKELQVSLFQALVLLLFNEGDNLSFEEVKAATNIEEGELRRTLQSL
ACGKARVLSKAPRGREVKDDDHFAFNNDFTNKLFRIKINQIQMKETSEEQKATEERVFQD
RQYQIDAAIVRVMKMRKALSHNLLISELYNQLKFPVKPADLKKRIESLIDRDYMERDKDN
PNQYNYVA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatcagctaaaacaccagttttggcagaagaaggtggaaataagagtagaaaa
cgtacacataacagcgacctgtgttctaaaacagacgatatgagtgctagtgaaaagaaa
tcgaacttttctttgttgaccacgaattccaatggagccgttaagacaacgttgccatct
atgcagtccaagcccggagcgacgacaaagaagttgataattaagaattttaaaagcaag
ccaaagttgccggagaactaccaggagacgacatggagcaagctgcgggaggccgttgtg
gccatccagacgtcgacggccatcgcctactcgctggaggagctgtaccaggcggtggaa
aatatgtgcagccacaagatggcatcccaactatatgtaaacctaacaaacctcgtagaa
gctcatgtgaaagcgaacatcgaacagttcctctcggagagcatggaccggcaggtgttc
ctcaagcgcatggacgactgctggcgcgcgcactgccgacagatgatcatgatccggagc
atattcctttatctagatagaacttatgttttgcagaatcctagtatacattcaatttgg
gacatgggtctagacctattccgtcaccacatcgctatgaacaccctgatacaaactcgc
actgtcgacggcctgttgttgctgatcgagcgcgagcgaggtggtgatgcagtggacatc
tcgctgctcaagagtctgctgcggatgctatcagacctgcagatataccaggacgcgttt
gaacacaagttcctccaagccacagagcgtctatacgccgcagaaggccagcgtcttgtg
cgtgagctcgccgtaccttcgtacttagcgcacgtagagaaacgactgcgagaggagaac
gaacggctgttacactatttggacccctctaccaaatggcaactaatacacacaattgaa
cgtatgctgctcagcgaacacttaaccgctatcctcagtaaaggcctggaggctctcatg
gacggtccaagacactccgaccttaccaccctgtataatctgttcagccgagttaaggac
ggcttgagtgagctctgtagccactttaatgcttatattaagaaaaaaggtcgcacgata
gtgatcgagccggaacgtgataaaagcatggtgggtgagctcctcgacttcaaggagcag
ctcgaccatgtggtggccacatgcttccagaggaacgacaagttcctgtactccctgcgg
gaggccttcgagttcttcatcaaccagcgccagaacaagcccgctgaacttattgccaag
ttcgtggacgtgaaactgcgcgcgggcaacaaagaagcaacggaggaggaactagagagg
ctgctggacaagatcatggtgctgttccggttcatccacggcaaggatgtgttcgaggct
ttttacaagaaggacttggccaagaggttgttggttggtaaatcagcttcagtggacgcg
gagaagtcgatgctgagcaaactgaagcaagagtgtggtggcggctttacctgcaagctg
gagggcatgttcaaagatatggagctgtcaaaagacatcaatattacttataaacagcac
ctagcgggcacacccgacaccagcggcctggagctgtccgtgtacatcctgaccatgggc
ttctggcccacgtacggcacggccgaggcgcgcctgccggccgcgctcacccgccagcag
gaccacttcaccaagttctacctcggcaagcactccggccgcaagctcacgtggcagccc
atgctggggcattgcgtgctgcgagcacatttcgcacagggtaacaaagaattacaagta
tcactgttccaagctctagtgctgctactcttcaacgaaggcgacaacttatctttcgaa
gaagtcaaagcggctacaaatattgaggaaggcgagctccggcgcacgctgcagtcgctg
gcgtgcgggaaggcgcgcgtgctcagcaaggcgccgcgcggccgggaggtcaaggacgac
gaccacttcgccttcaacaacgacttcaccaacaagctgttccgcatcaagatcaaccag
atacagatgaaggagactagcgaagagcagaaggcgacagaggagcgcgtgttccaggac
cggcagtaccagatcgacgcggccatcgtgcgcgtcatgaagatgcgcaaggcgctcagc
cacaacctgctcatctccgagctctacaaccagctcaagttccccgtcaagcccgcggac
ctgaagaagcgcatcgagtcgctgatcgaccgcgactacatggagcgagacaaggacaac
cccaaccagtacaactacgtcgcgtaa
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