Collinsella stercoris: LK434_00395
Help
Entry
LK434_00395 CDS
T07953
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LK434_00395 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cstc01007
]
LK434_00395 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cstc03016
]
LK434_00395 (lysS)
Enzymes [BR:
cstc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LK434_00395 (lysS)
Amino acid related enzymes [BR:
cstc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LK434_00395 (lysS)
Transfer RNA biogenesis [BR:
cstc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LK434_00395 (lysS)
Prokaryotic type
Other AARSs
LK434_00395 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_bind
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
UEA45607
LinkDB
All DBs
Position
94955..96940
Genome browser
AA seq
661 aa
AA seq
DB search
MAENLEVNEAANTLNDERARRLADRAALYEAGKNPYPEHSSVTDHAADLLVRYEGLANEE
FASETVTVGGRVVAKRGQGKIMFLVLRDPSADIQLFCRVNDVEEESWATLKKLDLGDIIQ
ATGVVTRTKRGELSVAPRELKLLSKAVRPLPEKFHGLSDKETRYRQRYVDLIVNEDVRET
FRKRSAIISTFRRYMEDDGYMEVETPILQSIQGGATAKPFITHFNALNQENYLRIATELH
LKRLLVGGYERVFEIGRIFRNEGMDLTHNPEFTTMEAYRAYSDLEGMKELAEGVIKAAAT
AVGLEGIIEYQGQQIDLFSPWASRSMTEIVSDVLGREVTLDTPVEELFAACAERGIETKP
EWTAGKLIAEIYDELGEDTIVNPTFVCDYPVEVSPLAKRNEEDPRLTHRFELVIAGHEYA
NAFSELNDPVDQAERFAAQMAEKAGGDDEAMEYDEDYVRALEYGMPPAGGIGIGIDRVVM
LLTNSTSIRDVLLFPHMKPEKGSKSGAAAAKAAQDSAAAGAASPFVTPAKPTLDYSKVVV
EPLFEDFVDFDTFAKSDFRAVKVKDCVAVPKSKKLLNFTLDDGTGTDRTILSGIHDYYEP
EDLVGKTLIAITNLPPRKMMGIPSCGMIISAVHAEAEGDETPERLNVLIVDDSIPAGAKL
Y
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaacctcgaggtcaacgaggccgccaacaccctgaacgacgagcgcgcccgt
cgtctcgccgaccgcgccgcgctctacgaggccggcaagaacccctatccggagcactcg
agcgtaaccgatcacgccgccgacctgctcgtgcgctacgagggcctggccaacgaggag
ttcgcgagcgagaccgtcaccgtaggcggccgcgtggtcgccaagcgcggtcagggcaag
atcatgttcctggtcctgcgcgacccctccgccgacatccagctcttctgccgcgtgaac
gacgtggaggaagagtcgtgggccacgctcaagaagctcgacctgggcgacatcatccag
gccaccggcgtggtcacccgcaccaagcgcggcgagctctccgttgccccgcgcgagctc
aagctgctctccaaggccgtccgcccgctgcctgagaagttccacggcctctccgacaag
gagacccgctatcgccagcgctatgtcgacctcatcgtgaacgaggacgtgcgcgagacg
ttccgcaagcgctccgccatcatttccaccttccgccgctacatggaggacgacggctac
atggaggtcgagacccccatcctgcagtccatccagggcggcgccacggccaagccgttc
atcacgcacttcaacgcgctcaaccaggagaactacctgcgcatcgccaccgagctgcac
ctcaagcgcctgctggtgggcggctatgagcgcgtgttcgagatcggccgcatcttccgc
aacgagggcatggacctcacccacaaccccgagttcaccaccatggaggcctaccgcgcc
tattccgacctcgagggtatgaaggagctcgccgagggcgtcatcaaggccgccgcgacc
gccgtgggcctcgagggcatcatcgagtatcagggtcagcagatcgacctcttctcgccg
tgggccagccgttccatgaccgagatcgtctccgacgtgctcggccgcgaggtcacgctc
gatacgcccgtcgaggagctgttcgccgcgtgcgccgagcgcggcatcgagaccaagccc
gagtggaccgccggcaagctcatcgccgagatctacgacgagctgggcgaggacaccatc
gtcaaccccacgttcgtgtgcgattacccggtcgaggtctcgccgctcgccaagcgcaac
gaggaggacccgcgccttacgcaccgcttcgagctcgtgatcgccggccatgagtacgcc
aacgcgttctccgagctgaacgatccggtcgaccaggccgagcgcttcgctgcgcagatg
gccgagaaggccggtggcgacgacgaggccatggagtacgacgaggattacgtgcgcgcg
ctcgagtacggcatgcctcccgcgggcggcatcggcatcggcatcgaccgcgtggtcatg
ctgctcaccaactccacttccatccgcgacgtcctgctgttcccgcatatgaagcccgaa
aagggctccaagagcggcgccgccgccgcgaaggccgctcaggactccgcggccgccggt
gccgcgagcccgttcgtcacgcccgccaagcccacgctcgattactccaaggtcgtcgtc
gagccgctgttcgaggacttcgtggacttcgacacctttgccaagagcgacttccgtgcc
gtcaaggtcaaggactgcgtggccgtgcccaagtccaagaagcttttgaacttcaccctg
gacgacggcaccggcaccgaccgcaccatcctctccggcatccacgattactacgagccg
gaggacctggtgggcaagacgctcatcgccatcaccaacctgcccccgcgcaagatgatg
ggcatccccagctgcggcatgatcatctccgccgtgcacgccgaggccgagggcgacgag
acgcccgagcgtctgaacgtgctgatcgtggacgattcaatcccggcaggcgccaagctc
tactag
DBGET
integrated database retrieval system
