Collinsella stercoris: LK434_00860 Help Entry LK434_00860       CDS       T07953                                  Symbol uvrA Name (GenBank) excinuclease ABC subunit UvrA   KO K03701   excinuclease ABC subunit A Organism cstc  Collinsella stercoris Pathway cstc03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:cstc00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     LK434_00860 (uvrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cstc03400]     LK434_00860 (uvrA) DNA repair and recombination proteins [BR:cstc03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      LK434_00860 (uvrA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       LK434_00860 (uvrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 AAA_21 AAA_23 RsgA_GTPase DnaJ_CXXCXGXG nSTAND3 AAA_15 Viral_helicase1 DNA_ligase_ZBD TRASH_HVO_1752_C Motif Other DBs NCBI-ProteinID:  UEA45687 LinkDB All DBs Position 200892..203777 Genome browser AA seq 961 aa AA seqDB search MSDSSIVIKGAREHNLQDIDVEIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS SYARQFLGQMDKPDLDSIDGLSPAVSIDQKTTSKNPRSTVGTVTEIYDYLRLLYARIGVP HCPECGREIERQTTDQVADKILEAGQGRRAFVLAPVVQGRKGEFTKLMDDLRAEGFSRVR IDGEVRSLDDTIELDKKFKHTIEVVVDRIVIRDTSLGRIAESVEQATKLAHGNVSVYLLP DRDAPEGSEGDLLTYSLALACPEHGHSIDDLQPRDFSFNAPYGACPECDGLGFKKVVDAE ALIEDPNLSIEEGVFGSFFGKSNYYPQIFRALCLHLKVDPATPWKDLPARVRKVFLDGLG DKKMRVDYKTQDGRDTHWSTKYAGVRNILYERYVETTNENTKAKLERYIREEPCSTCKGA RLRPEMLAVTVGGKSIYEVCCMSCRESLEFFRSLELTEREAFIGQAIVKEIGERLRFLVD VGLDYLTLDRASATLSGGEAQRIRLATQIGAGLMGVLYILDEPSIGLHQRDNERLIATLE RLRDLGNTVIVVEHDEDTIRAADFVVDMGPGAGEHGGKVVCAGTPEQIMACPDSMTGAYL TGRAMVRLPEERRNPGRGALKITGAKANNLHNVTAQIEFGTLTVVTGVSGSGKSSLVTDT IAPALTNAVHNSTRVVGPYKSIEGIDQIDKVIDIDQSPIGRTPRSNPATYIGLWDDLRAL FASVPESKARGYSPGRFSFNVPGGRCEACKGDGQIKIEMHFLPDIYVPCEVCGGKRYNRE TLEVRYRNKTIADVLDMSVTEALAFFGNIPQIKRKLQTLYDVGLGYVRLGQPATTLSGGE AQRVKLAKELHRKQTGKTFYILDEPTTGLHFEDVRQLVDVLQRLVDAGNTVLVIEHNLDV IKVADRIIDLGPEGGSGGGRIVVSGTPEKVAACEKSYTGRFLAPLLARDRERMAALPDAQ S NT seq 2886 nt NT seq  +upstreamnt  +downstreamnt atgtctgattcctccatcgtcatcaagggcgcgcgcgagcacaacctgcaggatatcgac gtcgagatcccgcgcgacaagctcgtggtcattaccggcctgtccggttcgggcaagtcg agccttgcgttcgacaccatttacgccgagggccagcgccgctacgtcgagagcctctcc agctatgcgcgccagttcctggggcagatggacaagcccgacctcgactcgatcgacggc ctgtcgcccgcggtgtccatcgaccaaaagaccacctccaagaacccgcgctccacggtg ggcacggtcaccgagatctacgactacctgcgcctgctgtacgcgcgcatcggcgtgccg cactgccccgagtgcgggcgcgagatcgagcgccagaccaccgaccaggttgccgataag atcctcgaggcagggcaggggcgtcgcgcctttgtgctcgcgcccgtggtgcagggccgc aagggcgagttcaccaagctcatggacgacctgcgcgccgagggcttctcgcgcgtgcgc atcgatggcgaggtgcgcagcctggacgacaccatcgagctcgacaagaagttcaagcac accatcgaggtcgtggtcgaccgcatcgtgatccgcgacacgagcctgggccgcattgcg gagtccgtggagcaggcgaccaagctggcccatggcaacgtgagcgtgtacctgctgccc gatcgcgatgcgccggagggctccgagggcgacctgctcacgtattcgcttgcccttgcc tgcccggagcacgggcattccatcgacgacctgcagccgcgcgacttctccttcaacgcg ccctacggcgcctgcccggagtgcgacggcctggggttcaagaaggttgtggatgccgag gcgctcatcgaggacccgaacctctccatcgaggagggcgtgttcggcagcttcttcggc aagtccaactactacccgcagatcttccgcgcgctgtgcctgcacctcaaggtcgatccc gcgacgccgtggaaggacctgcccgcccgcgtgcgcaaggtgttcctcgatggtttgggc gacaagaagatgcgcgtcgactacaagacgcaggacgggcgcgacacgcactggtccacc aagtatgccggcgtgcgcaacatcttgtacgagcgctacgtcgagaccacgaacgagaac accaaggccaagctcgagcgctatatccgcgaggagccctgctcgacgtgcaagggcgcg cgcctgcgtcccgagatgctcgcggtcaccgtgggcggcaagtccatttacgaggtctgc tgcatgagctgccgcgagtcgctcgagttcttccgttcgctcgagttgaccgagcgcgag gcgttcatcggccaggccatcgtcaaggagattggggagcgcctgcgctttttggtcgac gtgggcctcgactacctcacgctcgaccgcgcctcggccaccctctccggcggcgaggcc cagcgcatccgtctggccacccagatcggcgcgggcctcatgggcgtgctgtacatcctc gatgagccgtcgatcggcctgcaccagcgcgataacgagcggctcatcgccacgctcgag cgcctgcgcgatctgggcaacaccgtgatcgtggtcgagcacgacgaggatacgatccgc gcggcggacttcgtggtggatatgggtcccggtgcgggcgagcacggcggcaaggtcgtg tgcgcgggcacgcccgagcagatcatggcgtgccccgactcgatgaccggcgcctacctc acgggtcgcgccatggtccgcttgcccgaggagcgccgcaaccccggccgcggcgcgctc aagatcacgggcgccaaggcgaacaacctgcacaacgtgaccgcccagatcgagttcggc accctcaccgtggtgacgggcgtgtccggttcgggcaagagctccctggtgaccgacacc atcgccccggcgctcaccaatgcggtgcacaactccacgcgcgtggtgggtccgtacaag tcgatcgagggcatcgaccagatcgacaaggtgatcgacatcgaccagagccccatcggc cgcaccccgcgctccaatcccgcgacctacatcggcctgtgggacgacctgcgcgcgctg ttcgcgagcgtgcccgagtccaaggcgcgcggctactcgcccgggcggttctccttcaac gtgcccggcggtcgctgcgaggcctgcaagggcgacggccagatcaagatcgagatgcac ttcctcccggatatctacgtgccgtgcgaggtctgcggcggcaagcgctacaaccgcgag acgctcgaggtccgctaccgcaacaagaccatcgccgacgtgctggacatgtccgtgacc gaggcgctggcgttctttgggaacatcccgcagatcaagcgcaagctgcagaccctctac gatgtgggcttgggctacgtgcgcctgggccagcccgccacgacgctctccggcggcgag gcccagcgcgtgaagctcgccaaggagctgcaccgcaagcagacgggcaagacgttctac atcttggacgagcccacgacgggcctgcacttcgaggacgtgcgccagctggtggacgtg ctgcagcgcttggtcgacgcgggcaacaccgtgctggtgatcgagcacaacctcgacgtc atcaaggtcgcggaccgcatcatcgacctgggccccgagggcggcagcggcggcgggcgc atcgtggtgtccggcacgcccgagaaggtcgcggcgtgcgagaaaagctacacgggcagg ttcctcgcgcctctcctggctcgcgaccgcgagcgcatggcggccctcccggacgcccaa tcttga

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