Collinsella stercoris: LK434_00915
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Entry
LK434_00915 CDS
T07953
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstc03019
]
LK434_00915 (rapZ)
Messenger RNA biogenesis [BR:
cstc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LK434_00915 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
SKI
DUF4154
Motif
Other DBs
NCBI-ProteinID:
UEA45697
LinkDB
All DBs
Position
215088..216008
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AA seq
306 aa
AA seq
DB search
MADSNSITSAELADRVPDIVIITGMSGSGRTQAMHAFEDMGYYCIDNLPPSLILQLAQII
GINSGVGRHLCVTSDLRSQGLFDELLDAIETLRDHEMTCKVVFLEASDEVLIRRYSENRR
RHPLATRGDTTADAIQRERMALASIRDRADMVIDTSRMRTAALRKRLQAAFSELTAEQLM
DVHVFSFGFKHGMPIEADLMIDVRFLPNPFYDPEMRTLTGLDAKVSDFVLDHPKTHEFLD
AWFRLLDAVMPGYIAEGKPQLSIAVGCTGGQHRSVAIAEATGRYLERQHYHVSISHRDLA
KANLRS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcgaacagcatcacctcggcggagctcgccgaccgcgttcccgacatcgtc
atcatcaccggcatgtccggctccggccgcacgcaggccatgcacgcattcgaggacatg
gggtactactgcatcgataatctcccgccgagcctcatcttgcagctcgcccagattatc
ggcatcaactccggcgttggccgccacctgtgcgtgacgagcgacctgcgcagccaaggc
ctgttcgatgagctcctcgacgcgatcgagacgctgcgcgaccacgagatgacctgcaag
gtggtgttcctcgaggcgtcggacgaggtgctcatccgccgttacagcgagaatcgccgc
aggcacccgcttgccacgcgcggcgacaccacagccgacgccatccagcgcgagcgcatg
gcgcttgcgagcatccgcgaccgcgcggacatggtcatcgacacgagccgcatgcgcacc
gcggccctgcgcaagcgcctgcaggccgcgttctccgagctcaccgccgagcagctcatg
gacgtgcacgtgttctcgttcggcttcaagcacggcatgcccatcgaggcggacctcatg
atcgatgtgcgctttttgcccaacccgttttacgatcccgaaatgcgcacgctgacgggg
ctcgacgccaaggtgtcggatttcgtgctcgaccaccccaagacgcatgagttcttggac
gcctggttccgcctgttggacgcggtgatgcccggctatatcgcggagggcaagccccag
ctttccatcgccgtgggctgcacgggcggccagcaccgaagcgtcgccatcgcggaggcg
acggggcgctacctggagcgccagcactatcacgtgagcatctcgcatcgagacctcgcc
aaggcgaacttgaggagctag
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