Collinsella stercoris: LK434_01045
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Entry
LK434_01045 CDS
T07953
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00230
Purine metabolism
cstc00240
Pyrimidine metabolism
cstc01100
Metabolic pathways
cstc01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LK434_01045 (nrdD)
00240 Pyrimidine metabolism
LK434_01045 (nrdD)
Enzymes [BR:
cstc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
LK434_01045 (nrdD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDD
ATP-cone
Gly_radical
Zn_ribbon_Nudix
DUF5817
Cas12f1-like_TNB
Zn_ribbon_RanBP
HTH_TIMELESS
HypA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
UEA45717
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Position
244424..246646
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AA seq
740 aa
AA seq
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MKIIKRSGSEVTFDLQKIINAINGANSEVKSGERLTDRQVRYAAENVAERCETAGHTVSV
EEIQDMVEDELMALDRFEVARHYIIYRYVQGLKRQKNTTDDKILSLIECNNEEVKQENSN
KNPTVNSVQRDYMAGEVSKDLTQRVLLPAEVVEAHNEGIIHFHDSDYFAQHMHNCDLVNL
EDMLQNGTVISGTLIERPHSFSTACNIATQIIAQVASCQYGGQSISLTHLAPFVEVSRQK
IRRQVEAELVELGVDAPEEKVVEVVEGRLRDEIRRGVQTIQYQVVTLMTTNGQAPFVTVF
MYLNEARSEAEKRDLAMIIEETLRQRYEGVKNEAGVWITPAFPKLIYVLEEDNVREGSEY
FYLTQLAAKCTAKRMVPDYISEKKMRELKLSKGETEGNGDCYTCMGCRSFLTPDRSGNGY
DNVARAKNYEPGKPKYYGRFNQGVVTINLPDVALSSHQDMDAFWEIFDERLELCHRALRC
RHERLLGTLSDAAPILWQYGALARLDKGETIDKLLYGGYSTISLGYAGLYECVKYMTGYS
HTDEHGTPFAMAVMQRMNDKCAEWKAAENIDYSLYGTPLESTTYKFSKCLQRRFGIIPGV
TDKGYITNSYHVHVSEEIDAFDKLKFESQFQRLSPGGAISYVEVPNMQDNLKAVIRVMQY
IYDNIMYAELNTKSDYCQECGYDGEIKIVEDDGKLVWECPHCGNRNQETLNVARRTCGYI
GTQFWNQGRTEEIRDRVLHL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatcaagcgcagcggttcggaggtcacgttcgaccttcagaagatcatcaac
gccatcaatggcgccaacagcgaggtgaagagcggggagcgcctcaccgaccgtcaggtt
cgctacgctgccgagaacgtcgccgagcgctgcgagaccgccggccacaccgtctccgtc
gaggagatccaggacatggtcgaggacgagctcatggccctcgatcgcttcgaggtcgcc
cgccactacatcatctaccgctacgtgcagggcctgaagcgccaaaagaacaccaccgac
gacaagatcttgtccctcatcgagtgcaacaacgaagaggtcaagcaggagaactccaac
aagaaccccacggtcaactccgtgcagcgcgactacatggccggcgaggtctccaaggac
ctcacccagcgcgtgttgctgcccgccgaggtggtcgaggcccacaacgagggcatcatc
cactttcacgattcggattactttgcgcagcacatgcacaactgcgacctcgtgaacctc
gaggacatgctgcagaacggcaccgtcatctccggcacgctcatcgagcgcccgcacagc
ttcagcacggcgtgcaacatcgccacgcagatcatcgcccaggtggccagctgccagtac
ggcggtcagtccatctcgctcacgcaccttgcgccgtttgtcgaggtcagccgtcaaaag
atccgccgtcaggtggaggctgagctcgtcgagcttggcgtggatgcccccgaggagaag
gtcgtcgaggtcgttgagggccgcttgcgtgatgagatccgccgtggcgtgcagaccatc
cagtaccaggtcgtgacccttatgacgacgaacggccaggctccgttcgtgacggtgttc
atgtatctcaacgaggctcgcagtgaagctgagaagcgtgacctcgccatgatcatcgag
gagaccctgcgtcagcgctacgagggcgttaagaacgaggccggcgtgtggatcacgccc
gcgttccccaagctcatctacgtgctcgaggaggacaacgtccgcgagggctccgagtac
ttctatctcacccagctcgccgccaagtgcaccgccaagcgcatggtgcccgactacatc
tccgagaagaagatgcgcgagctcaagctgtcgaagggcgagacggagggcaacggcgat
tgctacacctgcatgggctgccgcagcttcctcacgcccgaccgctccggcaacggctac
gacaacgtggcgcgcgccaagaactacgagcctggcaagcccaagtactacggtcgcttc
aaccagggcgtcgtgaccatcaacctgcccgacgtggcgctgtcctcgcatcaggacatg
gatgcgttctgggagatcttcgacgagcgcctcgagctctgccaccgcgccctgcgctgc
cgccatgagcgcctgctgggcaccctgtccgacgccgccccgattctgtggcagtacggc
gccctggcgcgcctggacaagggcgagaccatcgacaagctgctgtacggcgggtactcc
accatttccctgggttacgcgggcctgtacgagtgcgtgaagtacatgacgggctacagc
cacaccgacgagcacggcaccccgttcgccatggccgtcatgcagcgcatgaacgacaag
tgcgccgagtggaaggccgccgagaacatcgactactcgctgtacggcacgccgctcgag
tccaccacctacaagttctccaagtgcctgcagcgccgctttggcatcatcccgggcgtg
acggacaagggctacatcaccaacagctaccacgtccacgtctcggaggagatcgacgcg
ttcgacaagctcaagttcgagagccagttccagcgtctgtccccgggcggcgccatctcc
tacgtcgaggtacccaacatgcaggataacctcaaggccgtcatccgcgtgatgcagtac
atctacgacaacatcatgtacgccgagctcaacaccaagagcgactactgccaggagtgc
ggctacgacggcgagatcaagatcgtggaggacgacggcaagctggtgtgggagtgcccc
cactgcggcaaccgcaaccaggagacgctgaacgtggcgcgccgcacctgcggctacatc
ggcacgcagttctggaaccagggccgcaccgaggagatccgcgaccgcgtgctgcatttg
tag
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