Collinsella stercoris: LK434_01275
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Entry
LK434_01275 CDS
T07953
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
cstc
Collinsella stercoris
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UEA45762
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Position
292625..296218
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AA seq
1197 aa
AA seq
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MAAIKLDAKQERIVKTLEGPLFVSAGAGSGKTFTLTQRIMYALRPGSKPQGQWADPQVPE
PFLDSIDQVLAITFTEKAAEELKERIRAALIDEGMDAEAAKVDNAWISTIHGMCSRIIRA
HALDLGLDPAFGVAEYAEDLKRAAVEHVLRRAIAEDATGAGAYDDLLAVFALENESGSYS
ARSLMAILFKVLSAASASVGGLGAFCQVRPAPSHVALMEAYREIALAPSYANAEAAQRAL
DALDAYVGSARDMEALRTCFASCDALSLRGRGMGKDEKAAVAEVRRERTLFFAESYLGMK
GDALSQLMDLAADVQAEYEALKAEKSLLDNDDLLTRAYDALKDNPLVRDEFAGKFKMVMV
DEFQDTAQQQVELVRLLCSADGRELCTVGDAQQSIYRFRGADVSVFRRKKKEVELSGKGV
SCSLDVNFRSHADILAYADKIFEGGEGNPLGRDFLHLDSCGEATRKGARALVDPTTARRQ
AVLVAGGSSQERAQHKARAIAERFARLRAREGFAPGDMVILMKRLTDADVYARAVRAAGM
PCVVAGGTSVFRQAPEVGAITALLAFLANPDDGQKGLMPLLTSPMFCLGATELLALATHI
DPQAGIVDSRTLTGQVFLSGEIMEEFGELPLLTRAREVLGRAVRRVGNDRVADIVRDVVN
ESGWLFRLERSGQAQDRAVAANVLKALDIVERESAGRAFAPRLVARAYESHIAHIKESPA
ALNGADEDAVRIMTVHASKGLEFPVVAVAECDGISNDGDALQAVEREGRTYWSALPNRFD
LAGDADMLTVPELDEDNVTHEVPERAAEAFAYMKRENRLFDYEEAARLLYVAITRAREVA
IIAFGVRFATELVPEHPTSLVGEVLSRILPVDQGNDGLPDLGAGRLDFSDSKEGDFQLIA
LSELNYPAKKGVHRTYSIEEFGPDAGVDANGAAPEDGGLSAGGEGAGPRHVAIVTPAAVD
YRLVPAERSSRASYSYSSISRELHAEAEDRDVAVRTPQGEGADVADSGSREPGSSQAAHA
GDATDATNLGSVVHDACQWMIETGSDEVPVERVDALCRYWGCTSEQRVRIDAAIERWRGS
KVRAEVLRWPCVRAEVPFYSRGMEELGDRFGAYAEGAIDLLCTDPSDSGHALVIDYKTGG
HADETPEQLREKHALQARVYVDVLHKQGYGHVTLKFVRVEQPDPADPTQPQVVTYNL
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgatcaaactggatgccaaacaggagcgcatcgtcaagacgctcgaggggccg
ctcttcgtctccgcgggcgcggggtcgggcaagacgttcaccctcacgcagaggatcatg
tacgcgctgcgccccgggtcgaagcctcagggtcaatgggccgacccgcaggtgccggag
ccgtttttggatagcatcgaccaggtgctcgccatcacgttcaccgagaaggccgccgag
gagctcaaggagcgcatccgcgccgcgctgatcgacgaggggatggatgcggaggccgcc
aaggtcgacaacgcctggatctcgaccatccacggcatgtgctcgcgcatcatccgggcc
catgcgctcgacctcggcctcgaccccgcgttcggcgtggcggagtacgccgaggacctc
aagcgcgccgccgtcgagcacgtgctgcgccgcgcgatcgccgaggacgcgacgggcgcc
ggcgcgtatgacgacctgctcgcggtctttgccctggagaacgagagcggctcctacagc
gcccggagcctcatggcgattctgttcaaggtgctctccgccgcgtctgcctcggtgggc
ggcctgggcgcgttttgccaggtgcggccggccccctcgcatgtcgcgctcatggaggcg
taccgcgagatcgcgctcgcccccagctacgccaacgccgaggctgcccagcgcgccctc
gacgcgcttgacgcctatgtgggctccgcgcgcgacatggaggcgctgcgcacgtgcttc
gcctcctgcgacgcgctctccctgcgcgggcgcggtatgggcaaggacgagaaggccgcc
gtcgccgaggtgcgccgcgaacggaccctgttctttgcggagagctacctgggcatgaag
ggcgacgcgctgtcccagctgatggacctcgctgccgacgtccaggcggagtacgaggcc
ctcaaggcggagaagtcgctgctcgacaacgacgacctgctcacccgcgcctacgatgcg
ctcaaggacaacccgctcgtgcgcgacgagttcgcgggcaagttcaagatggtgatggtg
gacgagttccaggacaccgcgcagcagcaggtagagctggtgcgcctgctgtgcagcgcg
gacggccgcgagctgtgcaccgtgggcgatgcccagcagtccatctaccggttccgcggg
gcggacgtctcggtctttcgccgcaagaagaaggaggtcgagctgtctggcaaaggtgtg
agctgcagcctcgacgtgaacttccgcagccatgcggacatcttggcctatgcggacaag
atcttcgagggaggggagggcaacccgctcgggcgcgactttttgcatctcgattcctgc
ggcgaggcgacgcgcaagggcgcccgcgcactcgtggatcccacgaccgcgcgccggcag
gcggtgctcgtcgcgggcggtagctcgcaggagcgcgcgcagcacaaggctcgggccatt
gcggagcgcttcgcgcggttgcgtgcgcgcgaggggttcgcgccgggggacatggtcatc
ctcatgaagcgcctgaccgacgccgacgtgtacgcccgcgcggtccgcgccgcgggcatg
ccgtgcgtggtcgcggggggcacctcggtgtttcgccaggcccccgaggtgggcgccatc
acggcgctgctcgccttcctggccaatcccgacgacgggcaaaagggcctgatgccgctg
ctcacctcgcccatgttctgcctgggtgccacggagctgctcgccctggcgacgcacatc
gatccgcaggcgggcatcgtcgactcgcggacgctcaccggccaggtgttcctctccggt
gagatcatggaggaattcggcgagttgccgctgctcacgcgtgctcgcgaggtgctcggg
cgcgccgtgcgacgcgtcggcaacgaccgcgtggcggatatcgtgcgcgacgtggtgaac
gagtcgggatggctgttccggctggagcgcagcggccaggcgcaggaccgcgccgtcgcc
gccaacgtgctcaaggctctcgacatcgtggagcgcgagagcgccggccgcgcgttcgcc
ccgcgtctggtggcgcgcgcgtacgagagccacatcgcgcacatcaaggagtcgccggcg
gcgctcaacggcgccgacgaggacgccgtgcgcatcatgacggtgcatgcgtccaagggc
ttggagttccccgtggtcgccgtggcggagtgcgacggcatctcgaatgacggcgacgcg
ctgcaggcggtcgagcgcgaggggcgcacctattggtccgcgctgcccaaccgctttgac
cttgcaggggacgcggacatgctcacggtgccggagctcgatgaggacaatgtcacgcac
gaggtgcccgagcgcgccgccgaggcttttgcgtacatgaagcgcgagaaccggctgttc
gactatgaggaggcggcgcgcctgctgtacgtggcaatcacccgcgcccgggaggtggcg
atcatcgcctttggcgtccgctttgccacggagctcgttcccgagcaccccacttcgctg
gtgggcgaggtcctgagccgcatcctgcccgtcgaccagggcaacgacggcctgcccgac
ttgggcgcgggtcgtttggacttctccgattccaaggagggtgatttccagctcatagcg
ctctccgagctcaactaccccgccaagaagggcgtgcaccgtacgtattccatcgaggag
ttcggaccagatgcgggcgtggatgcgaatggcgcagcgccggaggacggtggcctttct
gcaggcggcgagggtgcggggcctcgccacgtcgccatcgtgacgcccgccgcggttgac
taccgcctggtgcccgccgagcgctcctcgcgcgcgtcgtacagctactcctcgatttcg
cgtgagctgcacgccgaggcggaggaccgcgatgtggctgtgcgcaccccgcagggggag
ggcgccgacgtcgcggattccggctcgcgcgagcccggttcttcacaggcggctcacgcg
ggcgacgccaccgatgccacgaatctgggttcggtggtgcacgatgcgtgccagtggatg
atcgagacgggctctgacgaggttcccgtggagcgggtcgacgccttgtgccggtattgg
ggctgcacgtccgagcagcgcgtgcgcatcgatgcggcgatcgaacgttggcgcggctcg
aaggtgcgcgccgaggttctgaggtggccgtgcgtgcgcgccgaggttccgttctacagc
cgcggcatggaggagctcggcgaccggttcggcgcatatgccgagggcgccatcgacctg
ctgtgcaccgatccgtcagattccggccatgcgttggtgatcgactacaagacgggtgga
catgcggacgagacgcccgagcagctgcgcgaaaagcacgcgctgcaggcccgggtgtac
gtcgacgtcctgcacaagcagggctacggccacgtgacgctcaagttcgtgcgcgtcgag
caacccgacccggcggaccccacccagccccaagtggtgacctacaacctctaa
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