Collinsella stercoris: LK434_01700
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Entry
LK434_01700 CDS
T07953
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LK434_01700 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cstc01007
]
LK434_01700 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cstc03016
]
LK434_01700 (trpS)
Enzymes [BR:
cstc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LK434_01700 (trpS)
Amino acid related enzymes [BR:
cstc01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LK434_01700 (trpS)
Transfer RNA biogenesis [BR:
cstc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LK434_01700 (trpS)
Prokaryotic type
LK434_01700 (trpS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
UEA45844
LinkDB
All DBs
Position
complement(394279..395328)
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AA seq
349 aa
AA seq
DB search
MPNELSYDVSLKRSNEIRADLPLHPEKYTMLTGDRPTGRLHLGHYFGTLKSRVELQELGV
HTNVLIADYQVITDRDSTENIQDNVYNMVIDYLACGLDPDKTMIYTHSAVPACNQLMLPF
LSLVSEALLQRNPTVKAEMEASNHELTGLLLTYPVHQACDILFCKGNVVPVGRDQLPHIE
LTRTIARKFNNRFGNVFPEVDALLSDTPLLPGLDGRKMSKSYGNAINISMTAEETAKRIK
KSQTDGERMITFDPEARPGVSGLLSTAAICTGRSEVEIAEEIGMGGSGQLKKYVTESVNE
YFAPIRERRAELERDLDYVKDVLHEGNRRANEVAEATLAEVREAMGMVY
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgaactcagctacgacgtgagcctcaagcgcagcaacgagatccgcgccgac
ctgcccctgcaccccgagaagtacaccatgctcacgggcgaccgccccaccggccgcctg
cacctgggccactacttcggcaccctcaagagccgcgtcgagctgcaggagctgggcgtc
cacaccaacgtgctcatcgccgactaccaggtcatcaccgaccgcgactccaccgagaac
atccaggacaacgtctacaacatggtcatcgactacctggcctgcggcctggatcccgac
aagaccatgatctacacccactccgccgtgccggcctgcaaccagctcatgctgccgttc
ctctcgctcgtgagcgaggccctgctgcagcgcaaccccacggtcaaggccgagatggag
gcgagcaaccacgagctcacgggcctgcttctcacctacccggtgcaccaggcctgcgac
atcctgttctgcaagggcaacgtggtgcccgtgggccgcgaccagctgccgcacatcgag
ctcacccgcaccatcgcgcgcaagttcaacaaccgctttggcaacgtgttccccgaggtc
gatgcgctgctgtccgacacgccgctgctgccgggcctggacggccgcaagatgagcaag
tcctacggcaacgccatcaacatctccatgaccgccgaggagaccgccaagcgcattaag
aaaagccagaccgacggcgagcgcatgatcacgttcgaccccgaggcgcgccccggcgtg
tccggcctgctctccaccgccgccatctgcaccggccgctccgaggtcgagatcgccgag
gagatcggcatgggcggctccggtcagctcaagaagtacgtgaccgagagcgtgaacgag
tacttcgcccccatccgcgagcgccgcgccgagctcgagcgcgacctggactacgtgaag
gatgtgctgcacgagggcaatcgccgcgccaacgaggtcgccgaggcgacgcttgccgag
gtccgcgaggccatgggcatggtgtactaa
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