Collinsella stercoris: LK434_02590
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Entry
LK434_02590 CDS
T07953
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00521
Streptomycin biosynthesis
cstc00523
Polyketide sugar unit biosynthesis
cstc00525
Acarbose and validamycin biosynthesis
cstc00541
Biosynthesis of various nucleotide sugars
cstc01100
Metabolic pathways
cstc01110
Biosynthesis of secondary metabolites
cstc01250
Biosynthesis of nucleotide sugars
Module
cstc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LK434_02590 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LK434_02590 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LK434_02590 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LK434_02590 (rfbB)
00525 Acarbose and validamycin biosynthesis
LK434_02590 (rfbB)
Enzymes [BR:
cstc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LK434_02590 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
UEA46011
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All DBs
Position
596121..597143
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AA seq
340 aa
AA seq
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MTTETFEPKSIVVTGGCGFIGSNFVHHVVRERPGVHVTVLDKLTYAGNPENIACLPADRV
ELVVGDICDAELVDRLVSEADAVVHYAAESHNDNSIADPSPFLKTNVRGTYTLIEACRKH
DVRYHHVSTDEVYGDLALDDPARFTEETPYRPSSPYSSTKAASDMLVRAWVRTFGLRATI
SNCSNNYGPYQHVEKFIPRQITNLIDGVRPKLYGDGKNVRDWIHTEDHSSAVWAILTRGR
IGETYLIGADGERDNITVLREILKAFGRDADDFDWVRDRPGHDRRYAIDSTKLRRELGWE
PQRIDFAAGLAETIAWYRANESWWRPAKEATEARYRAQGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagaccttcgagccgaagtccatcgtcgtcaccggcggctgcggcttcatc
ggcagcaacttcgtccaccacgtggtgcgcgagcgccccggcgtccacgtgaccgtgctg
gacaagctcacctacgcaggcaacccggagaacatcgcgtgcctgcccgccgaccgcgtg
gagctggtggtcggcgacatctgcgacgccgagctcgtggaccggctcgtgtcggaggcc
gacgccgtggtccactacgccgcggagtcccacaacgacaactccatcgccgacccctcg
cccttcctcaagaccaacgtgcgcggcacctacaccctgatcgaggcgtgccgcaaacac
gatgtccgctaccaccacgtctccaccgacgaggtctacggcgacttggcgctcgacgac
cccgcccgcttcaccgaggagaccccgtacaggcccagctcgccgtacagctccaccaag
gccgcatccgacatgctcgtgcgcgcctgggtgaggacgttcggcctgcgcgcgaccatc
tccaactgctccaacaactacgggccctaccagcacgtggagaagttcatcccgcgccag
ataaccaacctgatagacggcgtgaggccgaagctctacggcgacggcaagaacgtccgc
gactggatccacactgaggaccacagctcggccgtgtgggcgatcctcacccgcggccgc
ataggggagacctacttgatcggcgccgacggcgagcgcgacaacatcacggtgctccgc
gagatcctcaaggccttcggccgcgacgccgacgacttcgactgggtgcgagaccgcccc
ggccacgaccgccgctacgccatcgactcgacgaagctccgccgcgagctcggctgggag
ccccaacgcatcgatttcgccgcgggcctcgcggagaccatagcctggtaccgcgccaac
gagtcctggtggcgccccgccaaggaagcgaccgaggcgcgctaccgcgcccagggccag
tag
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