Collinsella stercoris: LK434_03095
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Entry
LK434_03095 CDS
T07953
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cstc
Collinsella stercoris
Pathway
cstc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LK434_03095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cstc02000
]
LK434_03095
Transporters [BR:
cstc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LK434_03095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DUF87
RsgA_GTPase
nSTAND1
AAA_29
DUF815
IncE
Motif
Other DBs
NCBI-ProteinID:
UEA46101
LinkDB
All DBs
Position
733542..735890
Genome browser
AA seq
782 aa
AA seq
DB search
MKTFSFLRHHKANLLLALVLLMIQAYSELTLPSIMSGIVDTGISRGGIESVVPDEITVDD
LSDLELFLTPDEVSQVSSAYGAADGAGVRSFIGSEDDRRALEGFLGQAEMLVFQLDKGVP
SDQLLESMGTDAATALGARPLAEGGAPFGLDDPSSGAPGAQAAAGRLPSVMGETIDMEDI
RTLVQAGVMSADELVAARGSLMDALGDSGETIVTSQAIEFVKRAYGNAGIDLGAVQTDYL
IREGAIMLGYALVAALCAIAAAYNASRTAAKVARDLRHDVYERVLSFSPAEMGAFSEASL
ITRATNDIQQIQMVLVMCMRMVLFAPCMGVGAVAKVVGFGSTGLQWIIVVGLVVISVVIG
LLMSLTMPKFRRMQDLVDRNNLVAREIITGIMPIRAFGRSASEEERYDEANRALTGTYIF
TNRAMSFMMPVMMMIMNVISIAIVWFGGHGVDAGTMQVGDLMAYMNYTMQVIMSFMIITM
VAVMLPRADIASERVQAVLATTSSVADPASSMTGAQRHMTADGEELPWTGVLSFDDVSFA
YPGAEEPTIEHVSFTVRPGQTLGVIGSTGVGKSTLVQLIPRLYDATEGSVTVDGVDVRRM
DLKELRSLIGYVPQKGMLFSGDIASNIAYGDPDLPDERIERAARIAQAADFIEEKPEGYE
SPISQGGTNVSGGQRQRLAIARALAIDPKILVFDDSFSALDYKTDSELRAALAREARGSA
VVIVAQRVATIMHADQIIVLDDGRVVGQGTHDELLRTCDAYREIAMSQLSSAELGLDEGE
VR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatttagctttttgaggcatcacaaggcgaacctgctgctcgcgctcgtgctc
ctcatgatccaggcgtacagcgagctcacgctgccgtcgatcatgagcggcatcgtcgac
accggcatcagccgcggcggcatcgagagcgtggtgcccgatgagatcaccgtcgacgac
ctgtccgacctcgagctgttcttgacgcccgatgaggtctcgcaggtctcgagcgcatat
ggcgccgccgacggcgcgggcgtgcgctcgtttatcggctctgaggacgaccgtcgcgcg
ctcgagggctttctcggtcaggccgagatgctcgtcttccagctcgacaagggtgttccg
tccgaccagctgctcgaatcgatgggcacggacgccgccacggcgctcggggcgcgcccg
ctggcggagggaggcgctccattcggcttggacgatccgtcgtccggcgcgcccggcgcg
caagccgctgcggggcggctgccgtccgtgatgggagagaccatcgacatggaggatatc
cgcacgctcgtgcaggccggcgtgatgtccgccgacgagctggtcgcggcgcgcggctcc
ctgatggacgcgctgggcgactccggggagacgatcgtcacctcgcaggccatcgagttc
gtcaagcgcgcctatgggaacgccggcatcgacctgggcgccgtccagaccgactacctc
attcgcgagggcgccatcatgctcggttacgcgctggtcgctgcgctttgcgccatcgcc
gccgcctacaatgcgtcgcgcacggcggccaaggtcgcgcgtgacctgcgccacgatgtg
tatgagcgcgtcctgtcgttctccccggcggagatgggcgcgttttccgaggcctccctc
atcacccgcgcgacgaacgacatccagcagatccagatggtgctcgtgatgtgcatgcgc
atggtgctcttcgccccctgcatgggcgtgggcgcggtcgccaaggtggtcggcttcggc
tccacggggctgcagtggatcatcgtggtcggactcgtggtcatctcggtggtcatcggc
ctgctcatgtcactcaccatgcccaagttccgccgcatgcaggacctcgtcgaccgcaat
aacctcgtggcgcgcgagatcatcacgggcatcatgcccatccgcgcgttcggtcgctcc
gccagcgaggaggagcgctacgacgaggcgaaccgcgcactcaccggaacgtatatcttc
accaaccgcgccatgagcttcatgatgcccgtcatgatgatgatcatgaacgtgatatcc
atcgccatcgtgtggtttggcgggcacggcgtcgacgccggcacgatgcaggtgggcgac
ctcatggcgtacatgaattacacgatgcaggtgatcatgagcttcatgatcatcaccatg
gtcgcggtcatgctgccgcgcgccgacatagcctcggagcgcgtccaggcggtgctggcc
accacgtcgagcgtggccgacccggcgtcgagcatgacgggcgcccagcgtcacatgacc
gcggatggcgaggagctcccctggacgggcgtgctctccttcgacgacgtgtcgttcgcc
tatcccggtgccgaggagcccacgatcgagcacgtctcgttcaccgtccgacccggtcag
acgctcggcgtcatcgggtcgaccggcgtgggcaagtcgacgctcgtgcagctcatcccg
cgcctttacgatgcgactgagggcagcgtcacggtcgatggcgtcgacgtgaggcgcatg
gacctcaaggagctccgctccctcatcggctatgtgccgcaaaagggcatgctgttctcc
ggcgacatcgcgagcaacatcgcctatggcgatccggacctgccggacgagcgcatcgag
cgcgccgcgcgcatcgcgcaggcggctgatttcatcgaggagaagcccgagggctacgaa
agcccgatctcgcagggcggcacgaacgtctcgggtgggcagcgccagcgcctggcgatc
gcgcgcgccctggcgatcgaccccaagatcctggtgttcgacgacagcttctcggcgctc
gactacaagaccgactccgagctccgcgccgccctggcgcgcgaggcgcgcggcagcgcc
gtcgtgatcgtggcgcagcgcgtggcgaccatcatgcatgccgaccaaatcatcgtgctg
gacgacggccgcgtggtggggcagggcacgcacgatgagctcctgcgcacctgcgacgcg
tatcgggaaatcgcgatgagccagctcagctccgccgagctcggactcgatgaaggggag
gtgcgctaa
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