Collinsella stercoris: LK434_03160
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Entry
LK434_03160 CDS
T07953
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cstc03036
]
LK434_03160 (smc)
Chromosome and associated proteins [BR:
cstc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LK434_03160 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
Laminin_II
AAA_27
Snapin_Pallidin
ABC_tran
BLOC1_2
Tropomyosin
OVT1
DUF1664
ApoC-I
Motif
Other DBs
NCBI-ProteinID:
UEA46114
LinkDB
All DBs
Position
746910..750446
Genome browser
AA seq
1178 aa
AA seq
DB search
MYLKSLTLKGFKSFADRAHMTFEPGLTVIVGPNGSGKSNVSDAILWVLGEQSAKQLRGQA
MEDVIFSGSSARKPVGVAEVTLVLDNSDHMLPVDFNEVAITRRMYRSGESEYLINSSPCR
LMDIQDILHDSGLGKDTHSIISQGKLDAILQSRPEERRSLIEEAAGISKHKRRKERALRK
IKSMDEHLTRARDINREISRQLKPLERQVDRARKYKDLSSRANELTQILAVDELRQLQAQ
WVDLEASSRESAASLELARYRLSEKERELEKLQVMLEEKGLFVGDLGEQRRHMQDVVGRI
GSDMRLLEEKGRNMVARLSEMRGTLSGSEHQRRRTVEELSDVNRQLDEERAAATVASDDV
AALEPASDELHARRVELDEAISALVREQREVQRTADAASLDLVKVKETLSNAEIEDGMYA
RRLEQIDEEADELQASLDFRRTRVEELEAELESARDRRDEAKGAVDVALAALDDLRDKEA
RAREKLADVRSELSGLRKVDASLSDASPLTARVVSNHPDAIAARLGDVIEAPVELEGLVE
QLLAGDIDALVCMSGPALARAASFALEAGDATGEALLLARDVDAPAACDGAPGYRLVERL
QVRDGYAPAVAALLGHVYVVDTLDEALAAPALPGVLYVTPQGARVRDGGVVRVGASSGAA
AGSLERKRRIRELERFEPELVAVFDRAVERVAEAADAIEQARAAERDAAGSISRLEGERS
SLLSEVGRMEHSLSVKLGERSNLARRREEAAAAVREAQPRVDELEQTRDEARERLDDLGR
RIAEAQDDLERVRRDDAEAGSKLADAKVRLARANERVKSLSARVPELERRLEGIDRRIRG
TEQSARSLEVLRLRVDPLHDRYQALSERAMDWAARLRDRASLEEADSASLKRTIEDAKGE
VARAKVEVDLATAAVNDAKVARGKLEVQVEAAVRAITADGTTVLEEALQLPAPDDRAAAE
RELNSLVRQINNLGPVNQVAMEEYETLKQRADYIATQLEDLESARKALTKITAAIDRKMR
TSFLTTFEKVDENFREVFSMLFPGGQAHLEMTDPEHPAETGIEVVAQPRGKRITKMMLMS
GGEKSLTALALLFAVYRTRTVPFYVLDEVEAALDDSNLSKLIGAIDYLRKTTQLLVISHQ
RRTMEDADVLYGVSMQADGVSRVVSQKLDRETGKVVNA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaagtcgctcaccctcaagggattcaaatccttcgccgaccgcgcgcacatg
acgttcgagccggggctcacggtcatcgtgggccccaacggttcgggcaaatccaacgtg
tccgacgccatcctgtgggtgctcggcgagcagagcgccaagcagctgcgcggccaggcc
atggaggacgtgatcttctccggttcgtcggcgcgcaagcccgtcggcgtggcggaggtc
acgctcgtcctcgacaactccgaccacatgctgccggtcgatttcaacgaggtcgccatc
acgcggcgcatgtaccgctcgggcgagagcgagtacctcatcaactccagcccgtgccga
cttatggacatccaggacatcctgcacgactccggcctgggcaaggacacgcactccatc
atctcccagggcaagctcgacgccattttgcagagccgtcccgaggagcgccgcagcctc
atcgaggaggccgcgggcatctccaagcacaagcggcgcaaggagcgcgccctgcgcaag
atcaagagcatggacgagcacctcacgcgggcccgcgacatcaaccgcgagatctcgcgc
cagctcaagcccctcgagcgccaggtcgaccgcgcgcgcaagtacaaggacctgtcctcc
cgcgcaaacgagctcacgcagatcctcgcggtcgatgagctccgccagctccaggcccag
tgggtcgacctcgaggcctcctcgcgcgagagcgcggcctcgctcgagctcgcgcgctac
cgcctctccgagaaggagcgcgagctcgaaaagctccaggtcatgctggaggagaagggc
ctgttcgtgggcgacctgggcgagcagcgccggcatatgcaagacgtcgtgggacgcatc
ggctccgacatgcgcctgcttgaggaaaagggccgcaacatggtcgcccgcctctccgag
atgcgcgggaccctgtccggctccgagcatcagcgccgccgcaccgtcgaggagctctcc
gatgtcaaccgccagctcgatgaggagcgcgcggcggcaaccgtcgcctccgatgacgtg
gccgccctcgagcccgcctccgatgagctgcatgcgcgccgcgtcgaactggacgaggcg
atctcagccctcgtccgcgagcagcgggaggtgcagcggacggccgatgccgcctcgctc
gacctcgtcaaggtcaaggagacgctttccaacgccgagatcgaggacggcatgtacgcg
cggcgcctcgagcagatcgatgaggaggccgacgagctgcaggcgtccctcgattttcga
cgcacgcgcgtcgaggagctggaggccgagctcgagagtgcgcgcgaccggcgcgatgag
gcgaagggtgccgtcgatgtggcgctcgccgccctcgatgatctgcgcgacaaggaggcg
cgggcgcgcgagaagctcgcggacgtgcggtccgagctctccggccttcgcaaggtcgac
gcgagcctgagcgacgcctcgccgctgacggcgcgggtggtgagcaaccaccccgatgcg
atcgcggcgcgcctgggcgacgtgatcgaggcgcccgtggagctcgagggcctggtggag
cagctgctcgccggcgatatcgacgcgctcgtgtgcatgagcggtccggcgttggcgcgc
gccgcgtcgttcgcgctcgaggcgggcgacgccaccggcgaggcgctcctgctcgcgcgc
gacgtcgacgcccccgccgcgtgcgatggcgcgccgggctatcgcctggtcgagcgcctt
caggtgcgggacgggtacgcgcccgcggtggctgcgctgttgggccacgtgtacgtggtg
gacacgcttgacgaggcgcttgcggcgcccgcccttcccggcgtcctctacgtcacgccc
cagggcgcgcgcgtgcgcgacggcggcgtggtgcgcgtgggcgcctcgagcggcgccgcg
gccggatcgctcgagcgcaagcgccgcatccgcgagcttgagcggttcgagcccgagctc
gtggcggtgttcgaccgggccgtcgagcgcgtcgccgaggctgccgacgccatcgagcag
gcccgcgcggccgagcgcgacgcggcgggctccatctcccgcctggagggcgagcgctcc
tcgctgctctccgaagtcgggcgcatggagcactcgctgtccgtcaagctcggtgagcgc
tcaaacctcgcgcggcggcgcgaggaggccgccgcggccgtgcgcgaggctcagccgcgc
gtcgacgagctcgagcagacccgagacgaggcgcgcgaacgcctcgatgacctggggcgg
cgcatagcagaggcgcaagacgacctcgagcgcgtccgacgcgatgacgccgaggccggc
tcaaagctcgccgatgccaaggtgcgcttggcgcgcgccaacgagcgcgtcaagagcctc
tcggcccgcgtgcccgagctcgagcgccggctcgaggggatcgaccggcgcattcgcggc
actgagcagtccgcccgctcgctcgaggtgctccgcctgcgcgtcgacccgctgcacgac
cgctaccaggcgctgtccgagcgcgcgatggactgggcggcgcgcctgcgtgatcgcgcc
tcgctcgaggaggccgattcggcctcgctcaaacgcaccatcgaggacgccaagggcgag
gtcgcccgcgccaaggtcgaggtcgatctggccaccgccgccgtcaacgacgccaaggtc
gcgcgcggcaagctcgaggtgcaggtcgaggcggccgtgcgcgccatcacggccgatggg
accaccgtgctcgaggaggcgctgcagcttcccgccccggacgaccgcgcggccgccgag
cgggagctcaacagcctcgtgcgtcagatcaacaacctcggccctgtgaaccaggtggcc
atggaggagtacgagaccctcaagcagcgcgccgattacatcgcgacgcagctggaggac
ctcgagagcgcgcgcaaggcgctcaccaagatcaccgcggcgatcgaccgcaagatgcgc
acgagcttcctcacgaccttcgagaaggtcgacgagaacttccgcgaggtcttctccatg
ctcttcccgggcggtcaggcccacctggagatgaccgaccccgagcacccggccgagacg
ggcatcgaggtcgtcgcccagccgcgcggcaagcgcatcaccaagatgatgctcatgagc
ggcggtgagaagagcctcacggcgctggcgctgctgttcgccgtgtatcgcacgcgcacc
gtgccgttctacgtgctcgatgaggtcgaggcggcgctggacgattccaacctctccaag
ctcatcggcgccatcgactacctgcgcaagacgacgcagctgctcgtcatctctcaccag
cgccgcaccatggaggacgccgacgtcctctacggcgtgtccatgcaggccgacggcgtg
agccgtgtggtcagccaaaaactcgatcgcgaaaccggaaaggtcgtgaatgcctaa
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