Collinsella stercoris: LK434_03560
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Entry
LK434_03560 CDS
T07953
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LK434_03560 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cstc01007
]
LK434_03560 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cstc03016
]
LK434_03560 (glyS)
Enzymes [BR:
cstc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
LK434_03560 (glyS)
Amino acid related enzymes [BR:
cstc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LK434_03560 (glyS)
Transfer RNA biogenesis [BR:
cstc03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LK434_03560 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
UEA46186
LinkDB
All DBs
Position
complement(827622..829712)
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AA seq
696 aa
AA seq
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MASTRDFLFEIGVEEMPSAPLNNAVKQLKVLVAKGLDEAGLSHGDVRIVSSPRRLAALVS
DVAEATEEIHSVLRGPSAKIAFDADGNPTKAAEGFARKNGLTAAELIRREDTDGTEYVFA
EQNTPSEPAAPMLARMAEAVIAQIEWPNYRSQRWGAERATFVRPIRWICCLFGDDVVEVR
YADVVSGRTTRGHRVLSPGEHEVACPAVYEQVLESAHVLSAERRESVIREGIAQVEAELG
VHVDTPAKVFDEVVNLCEWPTVLVGHFDEEFLAVPSEIICESMLSNQRYFPTYDAQGNLT
RAFVVVSNADPAVSETVIDGNERVVRARLYDAKFFYDEDLKIDLEEFRSRLAKVGFQKKL
GTVLQKSERMEDLALAIAREARIGADAASDAQRAAHLAKADLVSSAVVEFTSQQGVMGGY
YAAAAGEAPEVAAAIRDHYRPRFAGDALPEGTAGCIVAVADKLDTIAGMFAIGEPPTGSK
DPFALRRSAIGVLNILRDRLGCGYEALVDAALDAYAEQGLEFDKAEVAASVCAFIKGRME
QMARDEKIAPDTVAAVSAGSVTTPAHYFELAHALEHARANDRAAFDNLATAYARAAHLAD
ASVGCEVDEALLGDAERVLLETIDAAEASVASALSAQDFPGVISALAALREPIDAFFDEV
MVMDEDERLRTNRLALLNRFAAVFSGIADLGAMARK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacgcgtgatttcctgttcgagatcggcgtcgaggagatgccctccgcgccg
ctcaataacgccgtcaagcagctcaaggtgctcgtcgccaagggcctggacgaggcgggc
ctgtcccacggggacgtccgcatcgtctcctcgccgcgccgcctcgccgcgctcgtgagc
gatgtcgccgaggccaccgaggagatccactccgtcctgcgcgggccttccgccaagatc
gccttcgatgcggacggcaaccccaccaaggccgccgagggcttcgcccgcaagaacggc
ttgaccgcagcagagctcatccgtcgcgaggataccgacggcacggagtacgtgttcgcc
gagcagaacaccccctccgagcccgcggcgcccatgctcgcccgcatggcggaggccgtc
atcgctcaaatcgagtggcccaactaccgtagccagcgctggggcgcggagcgcgcgacg
ttcgtccgccccattcgctggatctgctgcctgttcggcgacgacgttgtcgaggtgcgt
tacgcggacgtggtgagcggccgcacgacgcgcggccatcgcgtgctgtccccaggcgag
cacgaggtcgcctgcccggccgtgtatgagcaggtgctcgagtccgcgcacgtgctttcc
gccgagcgccgcgagagcgtcatccgcgagggcatcgcgcaggtcgaggccgagcttggc
gtgcatgtcgacacgcccgccaaggtgttcgacgaggtcgtgaacctctgcgagtggccg
accgtcctcgtgggtcatttcgatgaggagttcctcgccgtcccctccgagatcatctgc
gagtccatgctctccaaccagcgctatttccccacgtacgacgcgcagggcaacctcacg
cgcgccttcgtggtcgtctccaacgccgaccctgcggtcagcgagacggtcatcgacggc
aacgagcgcgtggttcgcgcccgcctgtacgacgccaagttcttctatgacgaggatctc
aagatcgaccttgaggagttccgctcgcgcctggccaaggtcggcttccaaaagaagctc
ggcacggtgctgcagaagtccgagcgcatggaggacctcgcgctcgccattgcccgcgag
gcgcgcatcggcgccgatgcggccagcgacgcccagcgcgccgcgcacctggcgaaggcg
gacctcgtgtcctcggccgtcgtcgagttcacgagccagcagggcgtgatgggtggctac
tacgccgcggccgccggagaggcacccgaggtcgccgccgctatccgcgatcactatcgc
ccgcgcttcgccggtgacgccctgcccgagggaacggccggctgcatcgtggccgtcgcc
gacaagctcgacaccatcgccggcatgttcgccatcggcgagcctccgaccggttccaag
gaccccttcgcgctgcgccgttcggccatcggcgtgctgaacatcctgcgcgatcgcctg
ggctgcggctatgaggcgctcgtcgacgccgcgctcgacgcttacgccgagcagggtctt
gagtttgacaaggccgaggttgccgcttccgtgtgcgctttcatcaagggccgcatggag
cagatggcccgcgacgagaagatcgcgcccgacacggtcgccgccgtgtccgctggctcc
gtgacgacgccggcgcattacttcgagctcgcccatgcgctggagcatgcgcgcgccaat
gaccgcgcggccttcgataacctcgcaaccgcctatgcccgcgccgcccacctggccgac
gcctccgtcggatgcgaggtggatgaggcgctcctgggtgacgccgagcgcgtgctgctc
gagacgatcgacgccgccgaggcatccgtcgcgtccgccctttccgcgcaggatttcccg
ggcgtcatctccgccctcgccgccctgcgcgagcccatcgacgcgttcttcgatgaggtc
atggtcatggacgaggatgagcgcctgcgcaccaaccgcctggctctgctcaaccgcttc
gccgcggtcttttccggcatcgccgacctcggcgcgatggcccgcaagtaa
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