KEGG   Collinsella stercoris: LK434_03740
Entry
LK434_03740       CDS       T07953                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cstc  Collinsella stercoris
Pathway
cstc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cstc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LK434_03740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cstc03019]
    LK434_03740
   03016 Transfer RNA biogenesis [BR:cstc03016]
    LK434_03740
Enzymes [BR:cstc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     LK434_03740
Messenger RNA biogenesis [BR:cstc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LK434_03740
Transfer RNA biogenesis [BR:cstc03016]
 Prokaryotic type
  tRNA degradation factors
   LK434_03740
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase S1_RRP5 KH-I_KHDC4-BBP KH_2 FlgM GldM_4th
Other DBs
NCBI-ProteinID: UEA46219
LinkDB
Position
complement(865118..867409)
AA seq 763 aa
MTLVSKTFDLFGKTYVLEAGELAKQATGAALVKQGDSTVLTTVVVSKERKNYDFFPLTVD
FNEKMYAAGRIPGGYLKREGRPSEKATLTARMIDRPIRPSFPDGFRNEVQVVATSLVADQ
KNPVDVICVMGASLAMTLGGVPFEGPLACVRIGRDKETGEFIVNPTYEERDASDLDLELA
GTRDFISMVEAGAEEVSEEDMLAAMQFGQEAIGAFCDAQLEFVAEWEQVNGAIVKREYPL
DEPNEEVHDRIFAHYDEMAAALRDADKLARQDKVAELKEAIKAEFTEEEQAAWEREIPVN
LKKLEKTAMRRMVVETGERVDGRAANEIRPIMVKGDYLPLVHGSGLFQRGQTQVLSVLSL
GMLNEGQRLDTIEPVEGKRYMHHYNFPPYCTGETGRMGSPKRREIGHGNLAERALIPVLP
DENEFPYAIRVVSEVMESNGSSSMASTCGSCLALMDGGVPIKRPVSGIAMGLIQEEGKTV
VLSDIQGLEDFLGDMDFKVTGTERGITALQMDNKATGLTFDILRTALEQAKEGRAFILDK
MLEVVPGPREDTRATAPKIQSITIPTENIRDVIGKGGETIRGIQDETGASIDIHEDGTVY
VGGVGDSVAAAIERIELIVKVPEVGEEYTGRVVSIQPFGAFVNLLPGKDGLLHISRVAQG
RVEKVEDVLNVGDEVKVTVIEIDDRGKISLDRLDKPEAPAGSGSGEGRGGERRERGDRPG
RGARDTGARGFDRPARRERGDRPRHPGDNGGAGRAPRRHHEAE
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgacactcgtaagcaagacctttgacctgttcggcaagacctacgtgctcgaggccggc
gagcttgccaagcaggccacgggtgccgcgctcgtcaagcagggcgactccaccgtgctc
accacggtcgtcgtctccaaggagcgcaagaactacgacttcttcccgctgaccgtcgac
ttcaacgagaagatgtacgccgccggccgcatcccgggaggctacctcaagcgcgagggc
cgtccttccgagaaggccaccctcaccgcccgcatgatcgaccgtccgatccgcccgtcc
ttccccgacggcttccgcaacgaggtccaggtcgtcgccacctccctcgtggccgaccag
aagaaccccgtcgacgtgatctgcgtgatgggcgcatcccttgccatgacgctcggcggc
gtgccgttcgagggcccgctcgcctgcgtgcgcatcggccgcgacaaggagaccggcgag
ttcatcgtcaaccccacctatgaggagcgcgacgcctccgatctcgacctcgagctcgcg
ggcacccgagacttcatctccatggtggaggccggtgccgaggaggtctccgaggaggac
atgctcgccgccatgcagttcggccaggaggccatcggcgccttctgcgatgcccagctc
gagttcgtggccgagtgggagcaggtcaacggcgcgatcgtcaagcgcgagtacccgctc
gatgagccgaacgaggaggtccacgaccgcatcttcgcccactacgacgagatggccgcc
gccctgcgcgacgccgacaagctcgctcgccaggacaaggtcgccgagctcaaggaggcc
atcaaggccgagttcaccgaggaggagcaggccgcgtgggagcgcgagatcccggtgaac
ctcaagaagctcgagaagaccgccatgcgccgcatggtcgtcgagaccggcgagcgcgtc
gacggacgtgccgccaacgagatccgccctatcatggtcaagggcgactacctgcccctg
gttcacggctccggcctgttccagcgcggtcagacccaggtgctctccgtgctctcgctc
ggcatgctcaacgagggccagcgcctggacaccatcgagcccgtcgagggcaagcgctac
atgcaccactacaacttcccgccctactgcacgggtgagaccggtcgcatgggtagcccc
aagcgccgtgagatcggccatggcaacctcgccgagcgcgcgctgattcccgtgctgccc
gacgagaacgagttcccctacgccatccgcgtggtctccgaggtcatggagtccaacggc
tcctcgtccatggcgtccacctgcggcagctgcctggcgctcatggacggcggcgtgccc
atcaagcgccccgtgtccggcatcgccatgggcctcatccaggaggagggcaagaccgtg
gtcctgtccgacatccagggcctcgaggacttcctgggcgacatggacttcaaggtcacc
ggtaccgagcgcggtatcaccgccctgcagatggacaacaaggccaccggcctgacgttc
gacatcctgcgcactgcccttgagcaggccaaggagggccgtgcgttcattctcgacaag
atgctcgaggtcgtccccggcccgcgcgaggacacccgcgctaccgcgcccaagatccag
agcatcaccatcccgacggagaacatccgcgacgtcatcggcaagggcggcgagaccatc
cgcggcatccaggacgagaccggcgcctccatcgacatccacgaggatggcaccgtgtac
gtcggtggcgtgggcgattccgtcgccgccgccatcgagcgcatcgagctcatcgtcaag
gtgcccgaggtgggcgaggagtacaccggtcgcgtggtttccatccaacccttcggcgcg
ttcgtgaacctgctgcccggcaaggacggcctgctgcacatctcccgcgttgcccagggt
cgcgtggagaaggtcgaggacgtcctcaacgtgggcgatgaggtcaaggtcacggttatc
gagatcgacgaccgtggcaagatctccctcgatcgccttgacaagcccgaggccccggct
ggctccggttcgggcgagggtcgtggcggtgagcgtcgcgagcgtggtgaccgtccgggt
cgcggtgcccgtgacaccggtgcgcgcggtttcgaccgccctgcgcgccgtgagcgcggc
gaccgtccgcgtcaccccggcgacaacggcggtgctggtcgcgccccgcgccgccaccac
gaggcggagtaa

DBGET integrated database retrieval system