Collinsella stercoris: LK434_04670
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Entry
LK434_04670 CDS
T07953
Name
(GenBank) Sapep family Mn(2+)-dependent dipeptidase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00300
Lysine biosynthesis
cstc01100
Metabolic pathways
cstc01120
Microbial metabolism in diverse environments
cstc01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LK434_04670
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cstc01002
]
LK434_04670
Enzymes [BR:
cstc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LK434_04670
Peptidases and inhibitors [BR:
cstc01002
]
Metallo peptidases
Family M20
LK434_04670
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
Peptidase_M28
M20_dimer
Dehydratase_SU
Motif
Other DBs
NCBI-ProteinID:
UEA46397
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All DBs
Position
complement(1087385..1088812)
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AA seq
475 aa
AA seq
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MRADVMESVDAYVDEVWEDVVADISTLVSHASVADASAAEPGAPFGRPVRAALDCALGIA
ERLGYQTGDDEGFVGYADIAGERAEHIATIAHVDVVPAGPGWATDPFAMERREGWLLGRG
VIDDKGPAVLSLYAGAYLLRQGITPRYTFRALLGCDEEVGMSDVHHYLESHEQPLFLFTP
DAEFPVCNAEKGCFGGTFASAPIEGGVIHSWSGAEATNAIPSESVCVLGVSVSELPVPRA
NADRVAVEALEDGSARIFAQGIGGHASLPEGTINAIALVVGYLREVAAARPELFAAQECA
FLDLLACVHEDTAGRGLGIASESAAFGPLTCNAGTIEVVDGRILQTIDVRFPDSITADEM
RMICNATAAQYGAEFCQGSVKEPFSVSADSPCVQALLNVYRQVTGRSAEPFSMGGGTYAR
NFASAVSFGPEDNSLELPAWAGTMHGPNEAVNEALLRDALKMYILALLRLNELDL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgatgtgatggagagcgtcgacgcgtacgtcgacgaggtgtgggaggacgtc
gttgcggatatctccacgctcgtttcgcacgcgtccgtggccgatgcgtcggctgccgag
cccggtgcgccgttcgggcgtcccgtgcgcgccgcgctggactgcgcgctcggcatcgcc
gagcgattgggctaccagacgggtgacgacgagggctttgtaggctacgcggatatcgcc
ggcgagcgcgcggagcacatcgccacaatcgcgcacgtggatgtggttcccgccggcccc
ggctgggccaccgacccgtttgccatggagcgacgcgagggctggctgctcggccgcggc
gtgatcgacgacaagggcccggcggtgctctccctgtatgcgggcgcgtacctgctgcgc
cagggcataacgccccgctacacgttccgcgccctgctggggtgcgacgaggaggtgggc
atgtccgatgtccatcattacctcgagtcgcatgagcagcccctgtttctgttcacgccc
gacgccgagttccccgtatgcaacgccgagaagggctgttttggcggcacgttcgcgagc
gcgcccatcgagggcggtgtgattcactcgtggagcggcgccgaggcgaccaacgccatt
ccgagcgagtcggtctgcgtgctcggcgtttccgtctccgagctgcccgtgccgcgggcc
aacgccgaccgcgtggcggttgaggcgcttgaggacggctccgcgcggatattcgcgcag
ggtatcggcggtcacgcctcgctgcccgagggcacgatcaacgccatcgcgctcgtcgtg
gggtacctgcgcgaggttgccgctgcgaggccggagctcttcgccgcgcaggagtgcgcc
ttcctggacctgctcgcctgcgtgcacgaggatacggcgggccgcggtttgggcatcgcc
tccgagagcgcggcgttcggcccgctcacctgcaacgccggcaccatcgaggtggtggac
ggccgcatcctgcagaccatcgacgttcgcttccccgattccatcacggcggacgagatg
cgcatgatctgcaacgcgacggccgcccaatacggtgccgagttctgccagggcagcgtc
aaggaaccgttctccgtctcggcggacagcccgtgcgtccaggcgttgctcaacgtatat
cgccaggttacgggcaggtcggccgaaccgttctcgatgggcggcggcacctacgcgcgc
aatttcgcgagcgcggtctcgtttggccccgaggacaattcgctggagcttccggcgtgg
gcgggcacgatgcacggtcccaatgaggctgtgaacgaggcgttgctgcgtgatgcgctc
aagatgtacattctggcgctgttgcgcctgaatgagcttgatttgtag
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