KEGG   Collinsella stercoris: LK434_04680
Entry
LK434_04680       CDS       T07953                                 
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
cstc  Collinsella stercoris
Pathway
cstc03010  Ribosome
Brite
KEGG Orthology (KO) [BR:cstc00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    LK434_04680 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cstc03011]
    LK434_04680 (rpsA)
Ribosome [BR:cstc03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    LK434_04680 (rpsA)
  Bacteria
    LK434_04680 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 S1_2 DUF2110 RNase_II_C_S1
Other DBs
NCBI-ProteinID: UEA46399
LinkDB
Position
complement(1089897..1091057)
AA seq 386 aa
MSEIQNSSIFSLDDVDTEEMNNLIDNSITDFDEGDLVNGTVVKIERDEVLVDIGFKSEGV
IPVRELSIRKDANPADLVALGDSIEALVLQKEDKDGRLVLSKKRAEYERAWNRIEEKFNA
GENVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLTSYLGTRIEARVIEMDRNRNN
VVLSRRVVLEESRKAERSEILSKLKSGMRLKGTVSSIVDFGAFVDLGGIDGLIHISELSW
NHVNHPSEVVKVGQEVEVEVLDVDLNRERISLGLKQTTEDPWRALVKKYPVGAIVEGTVT
KLVPFGAFVDLGDGIEGLVHISEMANKHVDQPAQVTAVGAKVQVKVMEIDLDRRRISLSM
KSAAETLGIEIEVAPLEGEEKAEDAE
NT seq 1161 nt   +upstreamnt  +downstreamnt
ttgagtgagattcagaactcgtccatcttctccctcgacgacgtcgataccgaggagatg
aacaacctcatcgacaactccatcaccgatttcgatgagggcgacctggtcaacggcacc
gttgtgaagatcgagcgcgacgaggtcctcgtcgacatcggcttcaagtccgagggcgtc
atccccgtccgcgagctgtccatccgcaaggacgccaaccccgccgacctcgtggcgctg
ggcgactccatcgaggcgctcgtgctccagaaggaggacaaggacggtcgtctggttctc
tccaagaagcgcgccgagtacgagcgtgcctggaaccgcatcgaggagaagttcaacgcc
ggcgagaacgtcgagggcgaggtcatcgaggtcgttaagggcggtctcatcctcgacatc
ggcctgcgcggcttcctgcccgcctccctcgtcgacctgcgccgcgtgaaggacctcacc
tcctacctcggcacccgcatcgaggcccgcgtcatcgagatggatcgcaaccgcaacaac
gtcgtgctctcccgccgcgtggtgctcgaggagtcccgcaaggccgagcgctccgagatt
ctctccaagctcaagagcggcatgcgcctcaagggcaccgtctcgtccatcgtggacttc
ggcgccttcgtggatctgggcggcatcgacggcctcatccacatctccgagctctcttgg
aaccacgtcaaccacccctccgaggtcgtcaaggtcggccaggaggtcgaggtcgaggtg
ctcgacgtcgatctgaaccgcgagcgcatctccctcggtctcaagcagaccaccgaggat
ccgtggcgcgcgctcgtcaagaagtaccccgtgggcgccatcgtcgagggcaccgtcacc
aagctcgtgccctttggcgcgttcgtcgacctcggtgacggcatcgagggtctcgtgcac
atctccgagatggccaacaagcacgtggaccagcctgcccaggtcaccgctgtgggcgcc
aaggtccaggtcaaggtcatggagatcgacctcgaccgtcgtcgcatctccctttccatg
aagtccgctgccgagaccctcggcatcgagatcgaggtcgccccgctcgagggcgaggag
aaggccgaggacgccgagtag

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