Collinsella stercoris: LK434_04680
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Entry
LK434_04680 CDS
T07953
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
cstc
Collinsella stercoris
Pathway
cstc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LK434_04680 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cstc03011
]
LK434_04680 (rpsA)
Ribosome [BR:
cstc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LK434_04680 (rpsA)
Bacteria
LK434_04680 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
DUF2110
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UEA46399
LinkDB
All DBs
Position
complement(1089897..1091057)
Genome browser
AA seq
386 aa
AA seq
DB search
MSEIQNSSIFSLDDVDTEEMNNLIDNSITDFDEGDLVNGTVVKIERDEVLVDIGFKSEGV
IPVRELSIRKDANPADLVALGDSIEALVLQKEDKDGRLVLSKKRAEYERAWNRIEEKFNA
GENVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLTSYLGTRIEARVIEMDRNRNN
VVLSRRVVLEESRKAERSEILSKLKSGMRLKGTVSSIVDFGAFVDLGGIDGLIHISELSW
NHVNHPSEVVKVGQEVEVEVLDVDLNRERISLGLKQTTEDPWRALVKKYPVGAIVEGTVT
KLVPFGAFVDLGDGIEGLVHISEMANKHVDQPAQVTAVGAKVQVKVMEIDLDRRRISLSM
KSAAETLGIEIEVAPLEGEEKAEDAE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgagattcagaactcgtccatcttctccctcgacgacgtcgataccgaggagatg
aacaacctcatcgacaactccatcaccgatttcgatgagggcgacctggtcaacggcacc
gttgtgaagatcgagcgcgacgaggtcctcgtcgacatcggcttcaagtccgagggcgtc
atccccgtccgcgagctgtccatccgcaaggacgccaaccccgccgacctcgtggcgctg
ggcgactccatcgaggcgctcgtgctccagaaggaggacaaggacggtcgtctggttctc
tccaagaagcgcgccgagtacgagcgtgcctggaaccgcatcgaggagaagttcaacgcc
ggcgagaacgtcgagggcgaggtcatcgaggtcgttaagggcggtctcatcctcgacatc
ggcctgcgcggcttcctgcccgcctccctcgtcgacctgcgccgcgtgaaggacctcacc
tcctacctcggcacccgcatcgaggcccgcgtcatcgagatggatcgcaaccgcaacaac
gtcgtgctctcccgccgcgtggtgctcgaggagtcccgcaaggccgagcgctccgagatt
ctctccaagctcaagagcggcatgcgcctcaagggcaccgtctcgtccatcgtggacttc
ggcgccttcgtggatctgggcggcatcgacggcctcatccacatctccgagctctcttgg
aaccacgtcaaccacccctccgaggtcgtcaaggtcggccaggaggtcgaggtcgaggtg
ctcgacgtcgatctgaaccgcgagcgcatctccctcggtctcaagcagaccaccgaggat
ccgtggcgcgcgctcgtcaagaagtaccccgtgggcgccatcgtcgagggcaccgtcacc
aagctcgtgccctttggcgcgttcgtcgacctcggtgacggcatcgagggtctcgtgcac
atctccgagatggccaacaagcacgtggaccagcctgcccaggtcaccgctgtgggcgcc
aaggtccaggtcaaggtcatggagatcgacctcgaccgtcgtcgcatctccctttccatg
aagtccgctgccgagaccctcggcatcgagatcgaggtcgccccgctcgagggcgaggag
aaggccgaggacgccgagtag
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