Collinsella stercoris: LK434_04685
Help
Entry
LK434_04685 CDS
T07953
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cstc03000
]
LK434_04685
Transcription factors [BR:
cstc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LK434_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_3
HTH_17
TetR_N
HTH_IclR
HTH_24
HTH_Tnp_ISL3
MerR
Sigma70_r4
HTH_26
HTH_7
Motif
Other DBs
NCBI-ProteinID:
UEA46400
LinkDB
All DBs
Position
1091356..1092360
Genome browser
AA seq
334 aa
AA seq
DB search
MSTIQEVAKRAGVSAGTVSRYLNGHQLKASNRIRVEAAIEELGYRSNYLARSLRSKQSMS
IGLLINNMLNHFAVSVVAQVEREMELNDYNIILSGFREDREVFVRKLENLIDRRVDGLIL
FEAIEDDRARRLLEQSGIPTLSISNPLPYSCVDNMLAANRASCREVTGRMIEAGHERIGI
LAASQDEYVSRERLAGVLEAFDEAGLPRKNAVVRIGGYERECGYRDMMALVNEDGMDCVF
VLNYGRSQGAQQALNELGLRVGEDISFACYDYLDTKTYFHPSITTVCPPSIEIGSRAARE
ILSMIEEGRLGSGKTTYTDEDIAWLPSIIGLKGC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccatccaagaagtcgccaaacgtgccggcgtctcggcgggaacggtctcgcgc
tacctcaacgggcatcagctcaaggcgagcaaccggatccgcgtcgaggcggccatcgaa
gagctcggctaccgcagcaactacctggcgcgcagcctgcgctccaagcagagcatgtcc
atcggcctgctcatcaacaacatgctcaatcattttgccgtgagcgtggtggcgcaggtg
gaacgcgagatggagctcaacgactacaacatcatcctctccggctttcgcgaggaccgc
gaggtgttcgtgcgcaagctcgagaacctcatcgaccgccgcgtcgacgggctcatcctc
ttcgaggccatcgaggacgaccgcgcgcgcaggctcctcgagcaaagcggcatcccgacg
ctctccatctcgaaccccctgccctattcgtgcgtggacaacatgctcgccgctaaccgc
gcgagctgccgcgaggtgaccgggcgcatgatcgaggcgggccacgagcgcatcggcatc
ctggccgcgtcgcaagacgagtacgtctcgcgcgagcgcctggccggcgtgctcgaggcg
ttcgacgaggcggggctgccgcgcaagaacgccgtggtgcgcattggcggctacgaacgc
gagtgcgggtaccgcgacatgatggcgctcgtgaacgaggacggcatggactgcgtgttc
gtcctcaactacgggcgcagccagggcgcgcagcaggcgctcaacgagctggggctgcgc
gttggcgaggacatctcgtttgcctgctacgactatctggacaccaagacgtacttccac
ccgagcatcaccaccgtgtgcccgccgtcgatcgagatcggctcgcgcgccgcgcgcgag
atcctctccatgatcgaggaggggcgcctgggctccggcaagacgacctacaccgacgag
gacatcgcctggctgccctcgatcatcgggctcaagggctgctag
DBGET
integrated database retrieval system
