Collinsella stercoris: LK434_04815
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Entry
LK434_04815 CDS
T07953
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cstc
Collinsella stercoris
Pathway
cstc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LK434_04815 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cstc03400
]
LK434_04815 (xseB)
Enzymes [BR:
cstc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LK434_04815 (xseB)
DNA repair and recombination proteins [BR:
cstc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LK434_04815 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Tn7_Tnp_TnsA_C
Motif
Other DBs
NCBI-ProteinID:
UEA46422
LinkDB
All DBs
Position
complement(1121586..1121852)
Genome browser
AA seq
88 aa
AA seq
DB search
MAERKNVEELTYKEASTELELIIRSLESGDMELEESLESYTRGVELLKSLRGRLADAEQK
VSVLLQDVDGTDQLVPGEPASDADALNL
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgcaagaacgtcgaggagctcacctacaaggaggcctccaccgagctcgag
ctcatcattcgcagcttggagtccggcgacatggagttggaggagtcgctcgagagctac
acccgcggcgttgagctcctcaagagcctgcgcggacgtttggccgatgcggagcagaag
gtctccgtgctgctgcaggacgtcgacggcaccgatcagttggtccccggcgagcccgcc
agcgacgccgacgccctcaacctttag
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