Collinsella stercoris: LK434_04965
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Entry
LK434_04965 CDS
T07953
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cstc03016
]
LK434_04965 (truA)
Enzymes [BR:
cstc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LK434_04965 (truA)
Transfer RNA biogenesis [BR:
cstc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LK434_04965 (truA)
Prokaryotic type
LK434_04965 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UEA46452
LinkDB
All DBs
Position
complement(1163448..1164293)
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AA seq
281 aa
AA seq
DB search
MTACIEPATVAAVCDEPEVLDGTLVFRLGYDGAGFSGFAEQPDVRTVAGEARRALETFLR
RPIDMTCAGRTDAGVHAISQYVSVPAHREELAIEHRRWMRAMAALLPDDIALSGVYHAAP
GFSARFDARSRTYTYRIATGDARPLLTRNVTWWHRLPLDVEAMEAGAVHLVGEHDFKSFC
KMSSAVGKPTCRNVISVSFAREQALGEDHLAFTITGNAFLHSMVRTIVGTLVEVGAGRRD
PAWVVEVLAACDRRAAGPTAPARGLCFMDVAYDEGVLSVCP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatgtatcgaacctgcgaccgtggcggcggtttgcgatgaacccgaggtactc
gacggcacgctggtgtttcgcttgggctacgatggcgccgggttttccggatttgccgag
cagcccgatgtgcgaacggtcgccggggaggcccgccgtgcgctcgagacgtttctgcgc
cgccccatcgacatgacgtgcgccggccgcaccgacgccggggtgcatgcgatctcgcag
tacgtgagcgtcccagcgcatcgcgaggagctcgccatcgagcatcgccggtggatgcgc
gccatggcggcgctgctgcctgatgatatcgcccttagcggtgtgtatcatgcggccccg
ggcttctcggcgcgcttcgatgcccgctcacgcacctacacgtatcgcatcgcgacgggg
gacgcccgtccgctgctcacgcgcaatgtgacgtggtggcaccgcctgccgctggacgtg
gaggccatggaggcgggcgccgtacatctggtgggcgagcacgacttcaagagcttttgc
aagatgtcctccgcggtgggaaaacccacgtgccgcaacgtgatctccgtgtcgttcgcg
cgtgagcaggcgcttggcgaggatcacctcgccttcaccatcaccgggaacgcctttttg
cattccatggtgaggacgatcgtgggcacgctcgtcgaggtcggcgcggggaggcgcgat
ccggcctgggtcgtcgaggtcttggcggcgtgcgaccgccgtgccgccggcccgaccgcg
cccgcacgcggtctgtgctttatggatgtggcctatgacgagggcgtgctgagcgtctgc
ccctag
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