KEGG   Collinsella stercoris: LK434_05365
Entry
LK434_05365       CDS       T07953                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cstc  Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:cstc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cstc03400]
    LK434_05365
Enzymes [BR:cstc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LK434_05365
    5.6.2.6  RNA 3'-5' helicase
     LK434_05365
DNA repair and recombination proteins [BR:cstc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LK434_05365
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2 ResIII MLTR_LBD
Other DBs
NCBI-ProteinID: UEA44584
LinkDB
Position
1251046..1253529
AA seq 827 aa
MNVFDRYAPFVQDFIYEHEWESLRSIQVAAADAIFNTDENVLLTASTASGKTEAAFFPIL
TEFWENPPASVGALYIGPLKALINDQFYRLNDLCDEADIPVWHWHGDVSASHKAKLLKKP
SGILQITPESLEALLLHKHLAVPRMFCDLRYIVIDEVHSLLRGDRGGQALCLIERLSRMA
GVNPRRIGLSATIGDPERTGAFLSAGTGRSCIIPRFEEPRRTWCLSIEHFYIGGPQAQER
ARSNNGVAEADIVSCSPVQNDSTSLEDLLSRAYAKDGEAELGPPHQGTTAVHEPQTEVYV
DTPASTELLAPTDTAPQDADPGLGYIFEHTRGRKCLVFVNSREEAEAVCASLRSYCEANH
EPDRFLIHHGNLSAAYRETAEELMRDEEQAQTTVTTATLELGIDIGRLERAFQIDAPFTV
SSFLQRMGRTGRRDLPPEMHFVMREEQPEPRAMLPETVPWKLLQGIALVQLYREEHWVEP
PALDRLPYSLLYHQVMGILASCGELTPAELAQRVLTLSYFHRVSADDLRCLLRHLIEIDH
IEVTESGGLIVGLAGERVTNSFKFYAVFQENEEFTVRCESAELGTIVNPPPAGERIAIAG
HCWLVEEVDWRRHLVYCTQIKGRVPAYFGDCAGDINTHILERMKRVLEEHEAYPYLMGNA
RARLAQARHVAQNAGIVGSPEAAANRRARTFSSGESPLINLGGDTWALFPWLGSYAFLAL
ERLLKIKCAAELGLKGLDPSRPYFMQFRMKADPQTFFEVVAAEAEDQFDPIDLVYPGEVP
YFDKYDEFLPQELVRKGFAEGVLDIEGMRERVVGWRDELHRTVGTIA
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgaacgttttcgatcgatatgccccctttgtgcaggacttcatctacgagcacgaatgg
gagtcgctgcgctccatccaggtcgccgccgccgacgccatcttcaatacggacgagaac
gtcctgctcaccgcctcgactgcatcgggcaagacggaggcggcgttctttcccatcctc
accgagttttgggagaacccgcccgcgtcggtgggggccctctacatcggccccctcaag
gccctcatcaacgatcagttctaccgcttgaacgacctgtgcgacgaggccgatatcccc
gtctggcattggcacggcgatgtctccgcgtcgcataaggccaaactactcaaaaagccg
agcggcatcctgcagatcacgcccgaatcgctcgaagcgctgcttttgcacaagcacctg
gcggtgccgcgcatgttctgcgaccttcgctacattgtgatagacgaggtccactcgctc
ctccgcggcgaccgaggagggcaagccctgtgccttatcgagcgactctcccgcatggcg
ggtgtcaacccgcgccgtattggactctccgcgaccatcggcgaccccgagcgcaccgga
gcgttcctctccgcaggcacgggacgcagctgcatcatcccgcgctttgaggagccgcga
cgcacatggtgcctgtcgatagagcacttctacatcggcggtcctcaggcacaagagcgg
gcgcgttcgaataacggagttgccgaagcggacatcgtgagctgttcgcccgttcaaaac
gattcgacgagtctagaggatctgctatcccgggcgtacgcgaaagacggcgaggccgag
ctcgggccgccacatcagggaacgaccgccgtgcatgaaccccaaaccgaggtgtacgtt
gataccccggcgtcgaccgagctcctcgccccaaccgacaccgcaccgcaagacgccgac
ccggggcttggatacatcttcgaacacacccgcggacgcaagtgcctcgttttcgtcaat
tcgcgcgaggaggcagaggccgtgtgtgccagcttgcgctcctactgcgaagccaaccac
gaacccgaccgtttcctcatccatcatggcaacttgtcggcggcctaccgcgagactgcc
gaggagctcatgcgcgacgaggagcaggcccaaaccaccgtcaccactgcgacgctggag
ctcggcatcgacatcggcaggcttgagcgggcatttcaaatcgacgccccctttaccgtt
tcgagtttcttgcagcgcatgggccgtaccggacggcgcgacctcccgcccgaaatgcac
ttcgtcatgcgtgaggagcagcccgagccgcgcgccatgctgcccgagaccgttccgtgg
aaattgctgcaaggtattgcgctcgtgcaactgtatcgcgaggagcactgggtggagccg
cccgcgctcgaccgtcttccctacagcttgctctaccaccaggtgatgggcatcctcgca
agttgcggtgagctcacgcccgcggaactcgcccagcgcgtgctcaccctgtcgtatttc
caccgcgtgagcgccgatgacctgcgttgtctgttgcgccatcttatcgagatcgaccac
atcgaggtcacggagtcaggcggcctcatcgtgggactcgccggcgaacgagtcacgaac
tcattcaagttctacgccgtgttccaagaaaacgaggagttcaccgtccgctgcgaaagc
gccgagctcggcacgatcgtgaaccctccccccgcgggagagcgcatagcgatcgccggc
cactgctggctggtcgaggaagtcgactggagacgtcatctggtgtattgcacccagatc
aagggacgtgtgccggcgtactttggcgactgcgcaggcgatatcaacacccatatcttg
gaacgcatgaagcgcgtgctcgaggagcacgaggcgtatccctatctcatgggcaacgcc
cgcgcacggctcgcgcaggctcggcatgtcgcgcaaaacgccggcattgtcgggtcgccc
gaagcggcagcgaacaggagagcacgcaccttctccagcggagagagcccgctcatcaac
ctgggcggcgacacatgggcgctcttcccctggctcggcagctacgccttcctcgcactg
gagcgcctgctcaagatcaaatgcgcggcggagctgggactcaaggggctcgatccctcc
cgtccctacttcatgcaattccgcatgaaagccgacccccagaccttctttgaggtggtc
gcagcggaggcggaagaccagttcgaccccattgaccttgtctacccgggcgaagtaccg
tacttcgacaaatacgatgaattccttccgcaagagctcgtgcgtaagggctttgcggaa
ggggttctggacatagaaggcatgcgcgaacgtgtggtgggctggcgcgatgagctgcac
cgcaccgtcggcacgattgcgtag

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