Collinsella stercoris: LK434_05870
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Entry
LK434_05870 CDS
T07953
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
cstc
Collinsella stercoris
Pathway
cstc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LK434_05870
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UEA44678
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Position
complement(1363047..1364483)
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AA seq
478 aa
AA seq
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MAVFSSGDPTGDLILAEGAGIDFAGSQDFANRRNRNVMFLASSGAGKTYGGVEPNLINHQ
PGSYVVTDTKGELYRATAEGFERDGYEVTRLDTIDLGRSACFNPFAFVRSEDDIPVVVKM
VLDAISTHREKTSDTFWPKSVEMCAGSLLGVLYNLEVINGCLSRCARALGIVEPRYMTMR
NLRRLLALVRVPSDGGPIDLSPLDHMVEQLSVGEMDDPFCPGRKLVFEPMGDSFGVRQYH
AFKSGAERTVKSIIISLQADLARVCTPEIERVLDHDEMHLDEIDERRRVIYLVMNDNDAA
NNFLGNLAFKQLIHEAMKKADANPGGKLKRPVQLIADEFCNLGRLDSFERAISVMRSRDM
GVIMCVQSLGQLDHVYGPQVRDIIMENCDAIVIMGTGSSLGTARFTSELCGTTSIASQRA
GEEGTVVSVEAPVITPTEVSRLPREQCIVKISGAKPFLTRKYDVARHPNASRFLKLGA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggtattcagttcgggcgacccgacgggcgacctcatcctggcggagggtgcggga
atcgacttcgcgggttcgcaagacttcgcgaatcgccgtaaccgcaacgtcatgtttttg
gcgagctccggtgcgggaaagacctatggtggcgtggagcccaaccttatcaatcatcag
ccggggagctacgtggtcacggataccaagggggagctctatcgtgcgactgccgagggc
ttcgagcgagatggatatgaggtcacgcggctggacaccatcgacttggggcgttcggcg
tgcttcaaccccttcgcgttcgtgcgctcggaggacgacattcccgtggttgtgaagatg
gtgctcgatgcgatcagcacacatcgggagaagacgtcagatactttctggcccaagtcc
gtcgagatgtgtgcgggttcgctcttgggagttctttacaatctcgaagtcatcaatggt
tgtctttcgagatgcgctcgggctctcggaatcgtcgaacctcgatatatgaccatgcgc
aatcttcgcaggctgctggcgcttgttcgcgtgccttctgatggcgggcccatcgacctc
tctccgctggaccacatggtcgagcagctgtcagtcggcgagatggacgaccccttctgc
ccggggcgaaagcttgtgttcgaacccatgggggactccttcggcgtgcgtcagtaccat
gcgttcaaaagcggcgcggaaaggaccgtcaagtcgataatcatctccctgcaggctgac
cttgcacgcgtctgcacacccgagatcgagcgcgttctcgaccatgacgagatgcacttg
gacgagatcgacgagcggaggcgcgtcatctacctggtcatgaacgacaacgacgccgcc
aacaacttcctgggcaacctcgccttcaagcagctcatacacgaggcgatgaagaaggcg
gacgccaaccccggcggcaagctcaaacgccccgttcagctcatcgccgacgagttctgc
aacttggggcgtctggactccttcgagcgcgccatctcggtcatgcgctcgcgcgacatg
ggcgtgatcatgtgtgtgcagagcctggggcagctcgaccatgtatatgggccccaggtg
cgcgatatcatcatggagaactgcgatgccatcgtgatcatgggaacgggctcctctctc
gggacggcgcgcttcaccagcgaactctgcggcacgacgtccatcgcctcgcaacgtgcg
ggcgaggaggggacggtggtgagcgtggaggcgccggtgatcacgcccaccgaggtgagc
cgtctgccgcgtgagcagtgcatcgtcaagatctcgggcgccaagccgttcctcacgcgc
aagtacgacgttgcgcggcatcccaacgccagccgcttcctcaagctaggtgcatag
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